Gene Rxyl_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1963 
Symbol 
ID4115755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1984195 
End bp1984959 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content74% 
IMG OID638036749 
Productpeptidase C26 
Protein accessionYP_644722 
Protein GI108804785 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.153313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCCGG TAATAGGGGT AACGGCGACG CTGAAGGAGG ACACCGAGCG GGTCGCCGAG 
CGCCCGCTGG GGCGCTTTGT TCGGGCGGAC GCGGACTACG TGGAGGGCGT GGTCGAGGCC
GGCGGGGTTC CGGTGGTGCT TGCGCCGGTG GCCGGGCCCG GGGCGGCCGA GACCCTGGTG
AGCGGTCTCG ACGGGCTCCT GCTCAGCGGG GGCAGCGACC TGGAGCCATC CCACTACGGC
GAGGAGGCGC TGCCGGAGCT CGGGGTCACG CTGCCCGAGC GGGACGAGTT CGAGATAGCC
CTGGCGCGCG GCGCGCTGCG GCGCGGCATC CCCATCTTCG GGATCTGCCG CGGGATGCAG
CTGTTGAACG TGGTGCTCGG GGGGACGCTC TACCAGGACA TCCCCTCCCA GCTGGGGAGG
GGCGTGCTCG GGCACCGGCA GCGGACGCCC AAGTGGCAGC CGGCGCACGA GGTGGAGGTT
CTGCCGGGGT CGCTTCTCGG CGGGATAGTC GGCCGGGGGG TGGTGAAGGT CAACTCCTAC
CACCACCAGG CGGTGAAGGA GCTCGCCCCG GGGCTCGTCG TCGGCGCCCG CTCTCCGGAC
GGGGTCATCG AGGCGATCGA GTCCCGGGAG CCGGGGGAGC GCTGGGTCCT GGGGATCCAG
TGGCACGCCG AGGCCATGCG CGCGGCCGGT CCCGAGCACC GGGCGCTCTT CGAGGCGCAC
GTATCGGCGG CGCGGCGCTA CGCCGGGCGC CGCGCCGCCG CCTGA
 
Protein sequence
MAPVIGVTAT LKEDTERVAE RPLGRFVRAD ADYVEGVVEA GGVPVVLAPV AGPGAAETLV 
SGLDGLLLSG GSDLEPSHYG EEALPELGVT LPERDEFEIA LARGALRRGI PIFGICRGMQ
LLNVVLGGTL YQDIPSQLGR GVLGHRQRTP KWQPAHEVEV LPGSLLGGIV GRGVVKVNSY
HHQAVKELAP GLVVGARSPD GVIEAIESRE PGERWVLGIQ WHAEAMRAAG PEHRALFEAH
VSAARRYAGR RAAA