Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1813 |
Symbol | |
ID | 4117257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1838353 |
End bp | 1839267 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638036610 |
Product | RNA polymerase, sigma 28 subunit |
Protein accession | YP_644584 |
Protein GI | 108804647 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.130349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGGTT TCGGTGAGGT CGAGCGGTCG GCGGTCCGGT CGCGCGAGGG GGCGCCGGCG GAGGCCTGTT GCAGCGATCC GGAGCCCGAG ACCCCCGAGC TTCTGGCCGG GTACTTGGAC CGCATAGGCA GATGGAGGCT CCTGACGCGC GACGGGGAGA TAGAGCTCTC CAGGAGGGCC AAGAAGGGCG ACAGAAAGGC CCGCCAGAAG CTCATAGAGA AGAACCTGAG GCTCGTTGTC TCGGTGGCCA AGAAGTACCG CGGCTACGGG CTGCCCTTCG AGGATCTCAT CCAGGAGGGC AACATAGGGC TCATGAAGGC GGTCGAGAAG TTCGACCCCG AGCGGGGCTT TCGCTTCTCT ACGTATGCGA CGTGGTGGAT AAGGCAGGCC GTGCAGCGGG CGGTTGCGGA CAAGGGCCGC ACCATAAGGG TACCGGTGCA CATGACCGAG AAGATCCGCA AGGTCAGCCG CACCTTCAAC GAGCTCTCTC TGGAGCTAGA GCGGGAGCCC ACCGACGAGG AGATAGCGCG CCGGCTGGAG TGGGATGTGG AGGACGTGCG GCTGACCATA AGCGCAATGC CCGACGCCAC GAGCCTCGAC CAGCCGGTCT CCAGCGAGGA GTCTGCCTCG GAGCTTGGGG ACTTCATCGA GGACGAGCGC ACCTCCGACA CCCCCGACAC GGTGCTCAAG GAGCTTGAGA GCAGCCAGCT CAAGGAGGCC ATAGAGCGGC TGCCGGAGCG GGCGCGCTAC GTGCTGGTGA GGCGCTACGG CCTCGACGAC CGGGAGCCGG CGACGCTGGC GGAGCTTGGG GACGAGCTGA AGATCTCTAG GGAGCGGGTC AGGCAGCTGC AGCGCGAGGC CGAGCGGCTG CTCAAGGCAG GGATCCGCCG GACGTCGCCT CGCTCGATAA CGTGA
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Protein sequence | MPGFGEVERS AVRSREGAPA EACCSDPEPE TPELLAGYLD RIGRWRLLTR DGEIELSRRA KKGDRKARQK LIEKNLRLVV SVAKKYRGYG LPFEDLIQEG NIGLMKAVEK FDPERGFRFS TYATWWIRQA VQRAVADKGR TIRVPVHMTE KIRKVSRTFN ELSLELEREP TDEEIARRLE WDVEDVRLTI SAMPDATSLD QPVSSEESAS ELGDFIEDER TSDTPDTVLK ELESSQLKEA IERLPERARY VLVRRYGLDD REPATLAELG DELKISRERV RQLQREAERL LKAGIRRTSP RSIT
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