| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1738 |
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| Symbol | |
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| ID | 4116638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1767184 |
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| End bp | 1768833 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036536 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_644510 |
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| Protein GI | 108804573 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0121059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGGG AAGAGAAGCG GCCCTGGCTA TCCGTCTACG GGGACAGGAT AAGGCCCAGG
ATCATCGAGG AGAGCCTGCC GGCCTTTCTG GAGGACGCGG CGCGCAGGTT TTCCTCCCAC
ACCGCCCTGA CCATGGGGGA GCGCGAGATC TCCTACCGGG AGCTGCTAGA GCTCTCCGAG
GGCTTCGCCG CCGCCCTCGC GGGAAGCGGG GTGTGTAAGG GCGACCGGGT GGGGCTCATG
CTCCCCAACT GCCCCGAGTA CGTCATAGGG TTCTTCGGCA CCGTGCGGGC GGGGGCGGCC
GCGACCCAGA TAAACCCCCT CTACACCGGG CGCGAGCTGG AGCACATCCT CTCCAACTCC
GGCACGCAGA CCGCCGTGGT CCACGCCGCG ACGTACGCGA AGGTCAAGGA GGTGCAGCCG
CGCACCCCGC TGCGGCGCGT GGTGTGCGTC GGCGAGCCGG AGGGCGGCCT CTCCGGCGGC
GACACCACCT TCGAGGAGTT CCTGCGCTCC GCGCCGGGCC CGCCCCCCGA GGTAAAGATA
GACCCCGAAG AGGATCTCGC CTCCCTCCAG TACACCGGCG GGACCACCGG CGTCTCCAAG
GGCGCGATGC TCACCCACCG CAACCTGCTC GGCGGGGTGC AGCAGACCAT AGACTTCCTC
ATCGAGGACC CCGGAGACTT CCCGGAGAAC GGCAAGGTCG TCGCCGTCGC CCCGCTCTTC
CACATCTTCG GGATGACCAT GGTGCTCCTG TTCGGCCTCC GGCACGGCTG GAATCTGCTG
CTCGTCCCGA AGTTCCAGCC CGACGAGATG ATGCAGCTCA TAAAGCGCGA GCAGCCCATC
ATGCTCGCCG GGGTCGCGAC CCTCTACATG GCGCTTCACA GCTACCCGCG GATGGAGGAC
TACGGACTGG ACAGGGTGCT TCTCTACACC TCCGGCGGGG CCAGCGTGCC CGTGGGGCTC
ATGCGCTCCT TCAAGCAGAA GACCGGCCGC GACATCTGGG AGGGCTACGG GCTCTCGGAG
GGCGCGCCGG TCTCGTTCAA CACCTACCTC AGGGGGCCGG TGCCCGGCAG CGTCGGCGTG
CCCATTCCCG GCACCGACGT GAGGGTGGTG GACCCCGAGA CGGGGGAGAG GGAGATGCCC
GTCGGGGAGC CCGGCGAGCT CGTCGTCAAG GGGCCGCAGG TCATGAAGGG CTACTGGAAC
ATGCCCGAGG AGACCTCCCT CGCGCTGCGG GACGGCTGGC TTTACACGGG GGACATAGTG
CGGATGGACG AGGAGGGCTA CCTCTACATC GTCGACCGCA AGAAGGACAT GATCAACGTC
AGCGGCTACA AGGTCTACCC GAGGGAGGTG GAGGAGGTCA TCTACTCCCA CCCGGAGGTG
GTGGAGGCCG TCGTTGTGGG AAGCCCCGAC CCCTACCGGG GGGAGGTGCC AAAGGCCTTC
GTGGTCATAA GAAGAAGAGG AGGGGAGGGC ACCTCCGTGA GCGAGGAGGA GCTCATCGAG
CACTGCAGGA GGGAGCTTGC CCCCTACAAG GTACCCAGGG AGGTGGAGTT CAGGGAGGAG
CTGCCCAAGA GCGCTGTGGG CAAGCTGCTC AGGCGGGTGC TTGCGCAGGA GGAGCGCTCC
CGCGGGCAGG AGCAGGGGAG CGCGGGATGA
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| Protein sequence | MLREEKRPWL SVYGDRIRPR IIEESLPAFL EDAARRFSSH TALTMGEREI SYRELLELSE
GFAAALAGSG VCKGDRVGLM LPNCPEYVIG FFGTVRAGAA ATQINPLYTG RELEHILSNS
GTQTAVVHAA TYAKVKEVQP RTPLRRVVCV GEPEGGLSGG DTTFEEFLRS APGPPPEVKI
DPEEDLASLQ YTGGTTGVSK GAMLTHRNLL GGVQQTIDFL IEDPGDFPEN GKVVAVAPLF
HIFGMTMVLL FGLRHGWNLL LVPKFQPDEM MQLIKREQPI MLAGVATLYM ALHSYPRMED
YGLDRVLLYT SGGASVPVGL MRSFKQKTGR DIWEGYGLSE GAPVSFNTYL RGPVPGSVGV
PIPGTDVRVV DPETGEREMP VGEPGELVVK GPQVMKGYWN MPEETSLALR DGWLYTGDIV
RMDEEGYLYI VDRKKDMINV SGYKVYPREV EEVIYSHPEV VEAVVVGSPD PYRGEVPKAF
VVIRRRGGEG TSVSEEELIE HCRRELAPYK VPREVEFREE LPKSAVGKLL RRVLAQEERS
RGQEQGSAG
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