Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1736 |
Symbol | |
ID | 4116636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1765213 |
End bp | 1765980 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638036534 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_644508 |
Protein GI | 108804571 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00832519 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGCTGG AGAACAGGAC GTTCCTCATC ACCGGCGGGG CCTCCGGGCT CGGGGCTGCT ACCGCGCGCC TGTTCGCCCA GAACGGCGCC GGCGTCGTGG TGGCCGACGT GAACGAGGCG GCGGGCGAGG AGACGGCCGC CGGGATAGGG GAGAGGGCGC GCTTTGTGCG CACCGACGTC ACCGACGAAG GCAGCGTGCG GAAAGCGGTG GACGCTGCCC TGCAGAGCTT CGGTGCGCTG CACGGCCTCA TAAACTGCGC CGGGATAGGA CCGGCCAGGA AGGTGCTCGG CAAGAAGGGC ATCCACCCGC TAGAGGACTT CGTGCGCGCC GTGCAGGTAA ACCTGGTAGG CACCTTCAAC GCCATCCGGC TTGCGGCGGC GGCCATGGCC GGGAACGAGC CGACGGAGGG CGGAGAGCGG GGGGTGATCG TCAACACCGC GAGCGTGGCG GCGTTTGAGG GCCAGATCGG GCAGGCAGCC TACTCTGCGT CCAAGGGAGG GGTGGTCTCC ATGACGCTGC CCATAGCGCG CGAGCTGGCC GAGCACGGCA TAAGGGTTGC AACGATAGCC CCGGGCATCT TCCAGACCCC GATGCTGGCT GCGCTGCCGG AGGGTGTGCG GGAGTCGTTG GGGGAGCAGG TACCGTTTCC GCGGCGGCTG GGCAGGCCGG AGGAGTACGC TGCGCTTGCG CGGCACATCG TCGAGAACGA GATGCTCAAC GGCGAGGTCA TAAGGCTCGA CGGCGCCATC CGGATGGCGC CGCGCTAG
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Protein sequence | MRLENRTFLI TGGASGLGAA TARLFAQNGA GVVVADVNEA AGEETAAGIG ERARFVRTDV TDEGSVRKAV DAALQSFGAL HGLINCAGIG PARKVLGKKG IHPLEDFVRA VQVNLVGTFN AIRLAAAAMA GNEPTEGGER GVIVNTASVA AFEGQIGQAA YSASKGGVVS MTLPIARELA EHGIRVATIA PGIFQTPMLA ALPEGVRESL GEQVPFPRRL GRPEEYAALA RHIVENEMLN GEVIRLDGAI RMAPR
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