Gene Rxyl_1689 details

Gene Information

• Locus tag: Rxyl_1689
• Symbol: prpE
• ID: 4116647
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 1711679
• End bp: 1713589
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638036487
• Product: propionyl-CoA synthetase
• Protein accession: YP_644461
• Protein GI: 108804524
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000127963
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGTTC GCGAGTACCG CGAGTTCTAC CGCCGGTCCA TAGAGGATCC GGAGGGCTTC 
TGGTCCGAGC AGGCGCGCCT CGTGGACTGG CGCCGGACGT GGGATGGGGT CCTGGACTTC 
TCCAGGCCGC CGTTCGCCAG GTGGTTTCCC GGCGGGCTGA CCAACCTGTG CCACAACGCC 
GTAGACCGGC ACCTGGAGGG GCGGGGCGGC CAGCGGGCGC TGGTCTACGT CTCCACCGAG 
ACGGGCGAGG AGCGCCACTA CACCTACCGC CAGCTCTACG CCGAGGTCAA CGCCTTCGCC 
GCGGCGCTGA GGGAGCTCGG CGTGGAGCGG GGCGACCGGG TGGTCATCTA CATGCCGATG 
ATGCCCGAGG CCATCTTCGC GATGCTCGGG TGCGTGAGGA TCGGGGCGAT ACACTCGGTG 
GTCTTCGGCG GCTTCGCCGC GGACAACCTG GCCAAGCGCA TAGACGATGC GAGACCCCGG 
GTGCTGGTCA CGGCGGACGC GGGGATGCGC GGCGGGAACG TGGTGCGCTA CAAGCCGCTG 
GTGGACCGCG CGCTGGAGAT GGCGCAGAGC CCGCCGGAGC GGGTGGTGAT CTGCAACCGG 
GGCATCGACC GGAAGATGCG GGCGGTTGGC GGAAGGGATC TGGACTACGC CGACCTTCGC 
GCCGGCCACG AGGGCGAGGA GGTGCCCGTG GAGTGGGTGG ACTCGACCCA CCCGAGCTAC 
ATTCTCTACA CCTCCGGCAC CACCGGCACC CCCAAGGGGG TGCAACGGGA CACCGGCGGG 
CACGCGGTGG CGCTCGCGGC CTCCATGCGG CACATCTTCG CCACCAACCC TGGCGAGACC 
ATGTTCACCG CCTCGGACAT CGGGTGGGTG GTCGGCCACT CGTACATCGT CTACGGCCCG 
CTGATGTACG GGCTGACCTC CATCGTCTAC GAGGGGCTCC CCGTCCGGCC GGACCCCGGC 
ATCTGGTGGA GGATAGTGCA GGATCACGGC GTCTCCACGA TGTTCACCTC GCCCACGGCC 
ATCCGGGCCC TCCGCAAGCA GGACCCGGAC TACATGCGCC GGCACGACAC CTCCTCCCTG 
CGCAACCTGT TCCTGGCCGG CGAGCCGCTG GACGAGCCCA CCTCCCGCTG GGCCTCGGAG 
TCGCTCGGGG TCGCGGTGCG CGACAACTAC TGGCAGACCG AGACGGGCTG GCCGATCCTG 
AGCAGCATGC TCCCGGGACT GGAGGACGAG CCGGTGGTTC CGGGCTCGGC GGGCTTCCCC 
TGCTACGGCT ACGACGTCCG CCTGATGCAC GAGCGGACCG GAGAGGAGGT CGGGCCCGGC 
GAGCGCGGGA TACTCGCCAT CCGGGCGCCG CTCCCCCCGG GCTGCATGAG CACCGTGTGG 
GGCGACGACC GGCGGTTCGT GGAGACCTAC TTCTCGGACT TCCCGGACAA GAACCTCTAC 
TCCACCTTCG ACTGGGGCGT GCGGCGGGAG GACGGCCGCT ACTTCATCAT GGGCCGCTCG 
GACGACGTGA TCAACGTCGC CGGCCACCGG CTGGGGACCC GGGAGATCGA GGAGGCCATA 
AGCGACCACC CGGAGGTGGC CGAGGCGGCG GCCGTGGGGG TGGCCGACGA GTACAAGGGG 
CAGGTGGTCT ACGCCTTCGT GGTCCCCAAG GACTCCCGGC GCCTGGAGAC GCAGGCGAAA 
AGGGAGGAGC TCGACCGCTC CGTGCGCGAG ATCGTGGCGC AGAAGGTCGG CCCCATCGCC 
CGCCCCGCCG CCGTGTACTT CGTGGAGGCG CTGCCCAAGA CCCGCTCGGG AAAGCTGCTG 
CGGCGCGGGA TACAGGCCCT CGCCGAAAGC CGCGACCCCG GCGACCTCTC CACCATAGAG 
GACCCCGCAG CCCTGGAGGC CGTCCGCTCG GCGGCCCGTA ACAGAGGCTA G 

 

Protein sequence

MGVREYREFY RRSIEDPEGF WSEQARLVDW RRTWDGVLDF SRPPFARWFP GGLTNLCHNA 
VDRHLEGRGG QRALVYVSTE TGEERHYTYR QLYAEVNAFA AALRELGVER GDRVVIYMPM 
MPEAIFAMLG CVRIGAIHSV VFGGFAADNL AKRIDDARPR VLVTADAGMR GGNVVRYKPL 
VDRALEMAQS PPERVVICNR GIDRKMRAVG GRDLDYADLR AGHEGEEVPV EWVDSTHPSY 
ILYTSGTTGT PKGVQRDTGG HAVALAASMR HIFATNPGET MFTASDIGWV VGHSYIVYGP 
LMYGLTSIVY EGLPVRPDPG IWWRIVQDHG VSTMFTSPTA IRALRKQDPD YMRRHDTSSL 
RNLFLAGEPL DEPTSRWASE SLGVAVRDNY WQTETGWPIL SSMLPGLEDE PVVPGSAGFP 
CYGYDVRLMH ERTGEEVGPG ERGILAIRAP LPPGCMSTVW GDDRRFVETY FSDFPDKNLY 
STFDWGVRRE DGRYFIMGRS DDVINVAGHR LGTREIEEAI SDHPEVAEAA AVGVADEYKG 
QVVYAFVVPK DSRRLETQAK REELDRSVRE IVAQKVGPIA RPAAVYFVEA LPKTRSGKLL 
RRGIQALAES RDPGDLSTIE DPAALEAVRS AARNRG