Gene Rxyl_1678 details

Gene Information

• Locus tag: Rxyl_1678
• ID: 4117163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 1696742
• End bp: 1697389
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 638036477
• Product: class II aldolase/adducin-like protein
• Protein accession: YP_644451
• Protein GI: 108804514
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
• TIGRFAM ID: [TIGR00760] L-ribulose-5-phosphate 4-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.672374
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGGGCTGA GGGAGGAGAT CGCCGGCGTC TGCCGCCGGA TGAGCGAGTC GGGGCTGGTC 
GTGGGGACCT CGGGGAACGT GAGCGCCCGC ACGGAGGATG GGGTGCTCGT GACCCCGAGC 
GGCCTGGACT ACGCGGTGCT GGAGCCCGAG GACGTGGTGC TGGTCGACCT GGAGGGGCGG 
GTGCTGGAGG GGGATCTGCT CCCCTCCGTC GAGACCCCGA TGCACACCGG GATCTACCGC 
GCCCGCCCGG ACGTCTCGGG CATCGTGCAC ACCCACTCGC GCTTCGCCAC CACGCTGGCC 
TGCCTGGGGT GGGAGATCCC CCCGGTCCAC TACATGCTCG CCGTGCTCTC GGACGAGGGC 
CGGGTGCCGC TGGCCCGCTA CGCCACCTAC GGCACGCCGG AGCTCGCGGC GAACGCGGTG 
GAGGCCCTCG GCGCCTCCCA CCGCGCCTGC CTCCTCCGCA ACCACGGCAC CATCGCCGTC 
GGCTCCTCCC CGGGCGAGGC CTACTCCCGC ACCGAGCTGC TGGAGGAGAT GGCCGAGCTC 
TACTACCGCG CCCGCCTGGC CGGGGAGCCG GTGCTGCTCG ATCCCGGGCA GCTCGCGGAG 
GTCTCGGCCA AGATCCACGA CTACGGCCAG TCCAAGCCCT CCCGGTAG 

 

Protein sequence

MGLREEIAGV CRRMSESGLV VGTSGNVSAR TEDGVLVTPS GLDYAVLEPE DVVLVDLEGR 
VLEGDLLPSV ETPMHTGIYR ARPDVSGIVH THSRFATTLA CLGWEIPPVH YMLAVLSDEG 
RVPLARYATY GTPELAANAV EALGASHRAC LLRNHGTIAV GSSPGEAYSR TELLEEMAEL 
YYRARLAGEP VLLDPGQLAE VSAKIHDYGQ SKPSR