Gene Rxyl_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1652 
Symbol 
ID4116261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1674606 
End bp1675700 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content70% 
IMG OID638036451 
Productpeptide chain release factor 1 
Protein accessionYP_644425 
Protein GI108804488 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.534857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGAGC AGGTCGTCAA GCTGGCAAAG GAGACGGTGG CGCGCTACAG GGAGCTCACG 
GAGGAGCTCT CCGACCCGGC CATCTTCAAC GACCAGCGCC GCTACGCCGA GGTCGCCCGG
GAGCACTCCC GGATGCGGCG CGGGGCCGAG CTGAGCGAGC GCTTTCTCGA GGCGTTGCGG
GAGGAGCGGG AGGCCCGGGA GCTGATCCCG GCCGCCGAGA GCGCCGAGGA GCGGGAGTTC
TTCGCCGGGG AGGCCCGGGA GGCCGGGAGG CGGGCGGGGG AGCTGGCCGA GGAGATAAGA
TCGGAGCTCA TCGACCGCGA CCCGAACGAC GACAAGGACG TGATCCTGGA GATCCGGGCC
GGGACCGGCG GGGACGAGGC GGCGCTGTTC GCCGGCGACC TCTACGAGAT GTACGCCCGC
TACGCGGATA GGCTGGGCTT CAGGCACCGG GTGCTGGACG CCAGCCCGGC CGAGGTCGGC
GGGTACAAGG AGATCATCGT GGAGATCGAG GGCGACGGCG CCTATTCGGT CTTCAAGCAC
GAGGGCGGCA CCCACCGGGT CCAGAGGGTC CCCAAGACCG AGAGCCAGGG GCGGATACAC
ACCTCCACCG CCACGGTGGC CGTGCTGCCG GAGGCCGAGG AGGTGGAGGT CGAGATAAAC
CCGAACGACC TGGAGATAGA CGTCTACCGC TCCAGCGGCC CCGGCGGGCA GAGCGTGAAC
ACCACCGACT CGGCGGTCAG GATCACCCAC AAGCCGACGG GCCTGGTGGT CACCTGCCAG
AACGAGAAGA GCCAGCTGCA GAACAAGGAG CAGGCCCTGA GGATCCTCCG CTCCCGCCTG
CTGGAGCGCG AGATGCGCGA GCGCCAGGAG AGGGAGGGCC AGATGCGGCT GGCGCAGTTC
GGCTCTGGCG ACAGGTCGGC CAAGATCCGC ACCTACAACT TCCCGCAGGG CAGGATCACG
GACCACCGCG TCGGCCTCAC CGTCCACAAC CTGGAGGCGG TGCTGGGCGG CGAGCTGGAG
GAGTTCACCA AGGCCCTGGC CGCCAAGGAG CGGGCCGACC GGCTGGCGGC CTCCGCGACC
GGAAGCCCTG GCTGA
 
Protein sequence
MDEQVVKLAK ETVARYRELT EELSDPAIFN DQRRYAEVAR EHSRMRRGAE LSERFLEALR 
EEREARELIP AAESAEEREF FAGEAREAGR RAGELAEEIR SELIDRDPND DKDVILEIRA
GTGGDEAALF AGDLYEMYAR YADRLGFRHR VLDASPAEVG GYKEIIVEIE GDGAYSVFKH
EGGTHRVQRV PKTESQGRIH TSTATVAVLP EAEEVEVEIN PNDLEIDVYR SSGPGGQSVN
TTDSAVRITH KPTGLVVTCQ NEKSQLQNKE QALRILRSRL LEREMRERQE REGQMRLAQF
GSGDRSAKIR TYNFPQGRIT DHRVGLTVHN LEAVLGGELE EFTKALAAKE RADRLAASAT
GSPG