Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1638 |
Symbol | |
ID | 4116345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1663772 |
End bp | 1665313 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638036437 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_644411 |
Protein GI | 108804474 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0091219 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAGA ACGGCGGAGC CGAGAGGGCT GTGAGCCAGG ACGGCCGCAG GGACGGCCAG CCCCGCGAGG GCGGGGTCGG ACGTGTCGTA GAGGTCAAGG GGCCGGTGGT CGACGTCCGG TTTCCGCCGG ACCAGATCCC GGAGATCTAC AACGCCCTGA CCTGCAAGAT AGAGACCGAG GAGGGGGAGC ACACCCTCAC CCTCGAGGTC CAGCAGCTGC TCGGGGACGA CATGGTGCGC ACCGTGGCCA TGTCCTCCAC CGACGGCCTC AGGCGGGGCG TCGAGGTGCA GGACACCGGC AGGCCGATAG CCGTCCCGGT GGGCGAGGCG GTCCTCGGGC GGGTGCTCGA CGTGCTCGGG GAGCCGGTGG ACGAGCAGGG GCCGGTCGAG GGCGAGGCCG ACCGCTGGCC GATCCACCGC CCCGCCCCCA AGTTCGAGGA CCTCTCCACC AAGGCCGAGC AGTTCGTCTC CGGCATCAAG GTCATAGACC TGCTGTGCCC GGTGAGGAGG GGCGGCAAGG TCGGCCTGTT CGGGGGCGCG GGCGTGGGCA AGACCGTGCT CATCACCGAG CTGATCAACA ACATCGCCCT GCAGTACGAG GGCACCTCGG TCTTCACCGG CGTGGGGGAG CGGACCCGCG AGGGGACGGC CCTCTACGGC GAGATGGAGG AGGCCGGGGT TCTCAAGAAC ACGGCGCTGA TCTTCGGCCA GATGAACGAG CCGCCCGGGG CCCGCTTCCG GGTGGGGCTG ACCGGCGTGA CCATCGCCGA GTACTTCAGG GACGTGCTCG GGCAGGACGT GCTGTTCTTC CTGGACAACA TCTTCCGGTT CGCCCAGGCG GGCAACGAGG TCTCGGCGCT GATGGGCCGG ATGCCCTCGG AGGTCGGCTA CCAGCCCACG CTGGGGACCG AGATGGGGGC GCTGCAGGAG AGGATCACCT CCACCAAGAA GGGTTCGATC ACCAGCTTCC AGGCGGTCTA CGTCCCGGCG GACGACCCGA CGGACCCCGC GCCGTTCACG GTCTTCGCCC ACCTGGACTC CACCGTCGAG CTCTCCCGGA GCCTCTTCGA GCAGGCCATC TTCCCGGCGG TGGACCCGCT GGCCTCCTCC TCGACCATCC TCGACCCCGA CGTGGTCGGG CAGGAGCACT ACGAGGTCGC CCAGGAGGTC AAGGGCATCC TGCAGCGCTA CAAGGAGCTG CAGGACATCA TCGCCATCCT CGGCATCGAC GAGCTCTCCG AGGAGGACAA GGTGATCGTG GCCCGCGCCC GGCGGCTGCA GCGCTTCCTC AGCCAGCCGT TCTTCGTGGC CGAGCAGTTC ACCAGCCTCC CCGGCAAGTT CGTGGAGCTC GAGGAGACCG TCCAGAGCTT CCGGGAGGTC GTCGAGGGCA AGCACGACGA CCTGCCCGAG CAGGCCTTCT ACCTGGTCGG CGGCATCGAC GACGTTCTGG AGAAGGCGCG CCAGCTCTCC GGCGAGGAGG AGGAAGGCGA GGAGGCCGCC AAGGAGGAGG CCGGCGTGGG GGCCGGCGGC GAGGGCAGCT GA
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Protein sequence | MAENGGAERA VSQDGRRDGQ PREGGVGRVV EVKGPVVDVR FPPDQIPEIY NALTCKIETE EGEHTLTLEV QQLLGDDMVR TVAMSSTDGL RRGVEVQDTG RPIAVPVGEA VLGRVLDVLG EPVDEQGPVE GEADRWPIHR PAPKFEDLST KAEQFVSGIK VIDLLCPVRR GGKVGLFGGA GVGKTVLITE LINNIALQYE GTSVFTGVGE RTREGTALYG EMEEAGVLKN TALIFGQMNE PPGARFRVGL TGVTIAEYFR DVLGQDVLFF LDNIFRFAQA GNEVSALMGR MPSEVGYQPT LGTEMGALQE RITSTKKGSI TSFQAVYVPA DDPTDPAPFT VFAHLDSTVE LSRSLFEQAI FPAVDPLASS STILDPDVVG QEHYEVAQEV KGILQRYKEL QDIIAILGID ELSEEDKVIV ARARRLQRFL SQPFFVAEQF TSLPGKFVEL EETVQSFREV VEGKHDDLPE QAFYLVGGID DVLEKARQLS GEEEEGEEAA KEEAGVGAGG EGS
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