Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1623 |
Symbol | |
ID | 4116330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1649169 |
End bp | 1649852 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638036422 |
Product | phosphoribosyltransferase |
Protein accession | YP_644396 |
Protein GI | 108804459 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.933338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGAGCC CGTACCTCGC GGCGCTCCTG GACCTCTTCT TCCCCCAGCG CTGCGCGGGG TGCCGCTCCA GGGCCAGCGA CGTGCTGTGC GGGGGCTGCG CGGAGAACCT CCCGCTCCTG GAGCCCCCGC TGTGCGCCCG CTGCGGGATG CCGGCGCCCT TCGAGGTTCC GGCTTGCTCC GGGTGCCGGG GGGTGGACCT GTGGTTCGAG GGCTTCCGGG CGCCGCTGCG GTACGAGGGG GTGGGGCGGG AGGCCGTCCA CGCCCTGAAG TACGGGGGGC ACGCACGGGT GGCCGAGAGG CTCGCCGCGC CGCTCCTTGC GCGCGTGCTT CCGGAGGGGA GGCTCGACGT CGTGGTGCCC GTCCCGCTGC ACCCCTCCCG GCTGCGCCGC CGGGGCTACA ACCAGGCCGC CCTCCTGGCC CGCGCGCTCG CCGGGAGGAT CGGGGTTCCC TTTTCGGATA AACTAAAGGC CGTGCGGAGG ACGCGGGACC AGGTGGAGCT CACGGCCGCC GGTCGGCGGG AGAACGTCCG GGGCGCGTTC GAGGCCCGCG GGCGGGTTCG AGGCAGGGTG CTGTTGGTGG ACGACGTGCT CACCACCGGG GCCACCATGA GCGAGTGCGC GCGGGTGCTG CTCGAGGCCG GGGCATCCGG GGTGTACGCC GTGGGCCTGT GCCGGGCCTG CTGA
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Protein sequence | MGSPYLAALL DLFFPQRCAG CRSRASDVLC GGCAENLPLL EPPLCARCGM PAPFEVPACS GCRGVDLWFE GFRAPLRYEG VGREAVHALK YGGHARVAER LAAPLLARVL PEGRLDVVVP VPLHPSRLRR RGYNQAALLA RALAGRIGVP FSDKLKAVRR TRDQVELTAA GRRENVRGAF EARGRVRGRV LLVDDVLTTG ATMSECARVL LEAGASGVYA VGLCRAC
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