Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1602 |
Symbol | |
ID | 4116349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1625509 |
End bp | 1626354 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638036402 |
Product | glutamate racemase |
Protein accession | YP_644376 |
Protein GI | 108804439 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.151201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGATC CCAGGCCCAT AGGCGTCTTC GACTCGGGGG TGGGGGGGCT GACGGTGCTC GCCGAGATCC GGGACCGGCT CCCCTACGAG CACACCATCT ACTTCGGGGA CACCGCGCGG GTGCCCTACG GGGTACGGGA TCTCGCGGAG GTCCGGTGGT TCGCCTACGA GATCATCCGC TACCTCGTGA GCCTCAACGT GAAGCTGGTG GTCATCGCGT GCAACACCGC CACGGCCGCG GCGCTCATGA CCGCCCAGCG CTCCTTCGAC GTGCCCATCA TCGGGGTTAT AGAGCCGGGG GCGCGGGCGG CGGTGCTGGA GACCAGAAAC CGCCGGGTGG GCGTCCTGGC GACCCCCGCC ACGGTGGAGA GCGGGGCCTA CGCCAAGGCG ATCTCCTACC TCGACGCGGG GATAGAAGTC TACGAGCAGG CGGCCCCCGA GTTCGTCCCG CTCATCGAGC GGGGGATCAC CTCCGGCCCC GAGCTGGAGG CGGCGGCCCG CCGGTACCTG GCTCCCCTGC AGGAGCGGGG GGCTGACGTC GTCATCCTCG GCTGCACCCA CTACCCGCTC ATCTCCGAGA CCATAAACAG GATCCTCGGC CCCAGGGTGC GCCTGATCTC CTCGGCCGGA CAGACGGCGC TGGAGGTGGG GCGGGTGCTC TCCCGCCGCG GTTACCTGCG CCGGCCCCGG CACGCCGAGG ACCTGGGGAG CTCCGTCTAC GTGTGCACCG CCGACCCCGA AGAGTTCGCC GCCCTCGGCA GCCGCTTCCT CGACCAGAAG ATAGAGGCCG TCCTCCCCGC CTCGCTGGAC CCCAGCCCCA GGTCCGACGC CCCTTTGCTA TACTAA
|
Protein sequence | MSDPRPIGVF DSGVGGLTVL AEIRDRLPYE HTIYFGDTAR VPYGVRDLAE VRWFAYEIIR YLVSLNVKLV VIACNTATAA ALMTAQRSFD VPIIGVIEPG ARAAVLETRN RRVGVLATPA TVESGAYAKA ISYLDAGIEV YEQAAPEFVP LIERGITSGP ELEAAARRYL APLQERGADV VILGCTHYPL ISETINRILG PRVRLISSAG QTALEVGRVL SRRGYLRRPR HAEDLGSSVY VCTADPEEFA ALGSRFLDQK IEAVLPASLD PSPRSDAPLL Y
|
| |