| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1568 |
|---|
| Symbol | |
|---|
| ID | 4116450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1590373 |
|---|
| End bp | 1592103 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638036365 |
|---|
| Product | formate--tetrahydrofolate ligase |
|---|
| Protein accession | YP_644342 |
|---|
| Protein GI | 108804405 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.110911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGAGG CTCTTTCCAA CCTCGAGATA GCAAGAGGAG CGAAGCTACT GCCCATAGAA
GAGGTGGGGC GCTCCATGGG CCTCAGAGAA GAGCGCCACC TCGAGCCCTA CGGCAGGCAC
GTGGCCAAGG TGGACCTCTG TGCCATAGAG GATCTCTCGG AGAGGCCAAA GGCGAAGTAC
ATCCTTGTCT CTGCCATAAC CCCAACCCCT CTTGGGGAGG GCAAGACCAC GACCACCGTT
GGTTTGGGGC AGGCCTTCTC GCACATAGGC AAGAGGGCCA CCATCGCCAT AAGGCAGGCC
TCCATGGGCC CTGCCTTTGG GATAAAGGGT GGGGCTGCTG GGGGAGGATA CTCGCAGGTT
GTGCCCATGG AGCGGCTCAA TTTGCACCTT ACGGGCGACC TGCACGCCGT GACAGAGGCG
CACAACATGC TCGCTGCGAT GATAGACAAC CACCTCTACC ACGGAAACGG GCTTGGGATA
GAGCCCCACT CCATCAGCTG GCGGCGGGTC ATGGACGTAA ACGACCGCAG CCTGAGGAAC
ATCGTCATAG GCCTTGGGGC CAGGACGGAC GGCGTCCCGC GCCAGTCGGG CTTTGACATA
ACGGCGGCCT CTGAGGTGAT GGCCATCCTT GCCCTTGCCA GCTCCCTTGA GGACTTGAGG
GAGCGCCTTG GCAGGATAGT CATAGGGCAC GACAGGGAGG GCAACCCCGT AAGCGCCGAG
GACGTAAGAG GGGCTGGGGC GATGGCTGTG ATCCTCAAGG AGGCCATAAA GCCCAACCTC
ATGCAGACCC TTGAGGGCAC CCCTGCGCTG GTGCACGCAG GTCCCTTTGG CAACATAGCC
ACCGGCAACT CCTCCGTCGT TGCCGACCTC ATAGGCATCC GCACCGCGGA CTACCTCATA
ACCGAGGCGG GCTTTGGGGC GGACATGGGG GCAGAGCGCT TCTTCAACAT AAAGTGCCGC
ATCTCGGGCC TTGAGCCGGA CGCTGCCGTA GTGGTTGCCA CGGTGCGGGC GCTCAAGGCC
CACTCGGGGC GCTACCAGAT AAAGGCCGGC GCTCCGCTTC CCGAAGAGCT GCTTGAGGAG
AACCCGCAGG ACGTTCTGGC GGGGGCCGAG AACCTCAAAA AGCAGATAGA GAACATAAAG
CTGCACGGGG TTCCGGCCGT TGTGGCCATA AACGCCTTTC CCACAGACCA CCCATCGGAG
CACAAAGCCA TAGAGGAGGC GGCAAAGGAG GTGGGGGCGA GGTGCGCCGT GTGCCGCCAC
TTCACCGAAG GAGGGAAAGG GGCGGTAGAG CTTGCGCGGG CCCTCGAGGA GACGATAGAG
GAGAACGAGA GGGAGAGAAG AAGGGGAGGA GGCGGCTCCT TCCGCTTTCT CTACCCGCTT
GAGATGCCGC TAAAGCAGAA GATAGAGACC ATAGCCAGAG AGGTCTATGG GGCAGAGGGG
GTAGAGTACG ACGCCGAGGC GCTGAGAGCC CTTGAGGGCT TTGAGCGGGC TGGGTTTGGG
AGGCTTCCCG TATGCCTGGC CAAGACGCAC CTCTCCCTCT CCTCCGACCC TGCTCTGAAA
GGGGCACCGA GAGGCTGGAA GCTCTCGGTG AGGGAGGTGA GGGCCTCTGT TGGGGCGGGG
TTCATCTACC CCATCTGCGG GCAGATGCGC ACCATGCCGG GCCTTTCGGC GCATCCGGCT
GCCGAGAGGA TAGACCTCGA TGGGGAGGGC AACGTAGTGG GGCTGTTTTG A
|
|---|
| Protein sequence | MGEALSNLEI ARGAKLLPIE EVGRSMGLRE ERHLEPYGRH VAKVDLCAIE DLSERPKAKY
ILVSAITPTP LGEGKTTTTV GLGQAFSHIG KRATIAIRQA SMGPAFGIKG GAAGGGYSQV
VPMERLNLHL TGDLHAVTEA HNMLAAMIDN HLYHGNGLGI EPHSISWRRV MDVNDRSLRN
IVIGLGARTD GVPRQSGFDI TAASEVMAIL ALASSLEDLR ERLGRIVIGH DREGNPVSAE
DVRGAGAMAV ILKEAIKPNL MQTLEGTPAL VHAGPFGNIA TGNSSVVADL IGIRTADYLI
TEAGFGADMG AERFFNIKCR ISGLEPDAAV VVATVRALKA HSGRYQIKAG APLPEELLEE
NPQDVLAGAE NLKKQIENIK LHGVPAVVAI NAFPTDHPSE HKAIEEAAKE VGARCAVCRH
FTEGGKGAVE LARALEETIE ENERERRRGG GGSFRFLYPL EMPLKQKIET IAREVYGAEG
VEYDAEALRA LEGFERAGFG RLPVCLAKTH LSLSSDPALK GAPRGWKLSV REVRASVGAG
FIYPICGQMR TMPGLSAHPA AERIDLDGEG NVVGLF
|
|---|
| |