Gene Rxyl_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1520 
Symbol 
ID4117064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1539376 
End bp1539699 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content69% 
IMG OID638036314 
Productcompetence protein ComEA helix-hairpin-helix region 
Protein accessionYP_644294 
Protein GI108804357 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.216127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCTCCT TCGCCGTTGT CCTGCTGCTC CTCGGCGGCG CCCTGTACGC CTCGCGCTTC 
TCGGAGGGCC GGCCGCAGGT GGTCTACAGC TTCTCGCTGG AGGAGGCCGC GCGCGAGGCT
CGCGAAGAGC CGCTCGTCGT GGACATAAAC ACCGCCGACG CGGAGGAGCT CGAGGAGCTG
CCGGAGGTGG GGCCCGCCAC CGCCGAGGCG ATAATCGAAT ACCGGCTGGC GAACGGTCCG
TTCAGGACGG TGGAGGAGCT GGAGGAGGTC CCGGGCATCG GGCCGGCGAC CCTGGAGCAG
ATAAGGCCGT TTGCGACGGT CTGA
 
Protein sequence
MVSFAVVLLL LGGALYASRF SEGRPQVVYS FSLEEAAREA REEPLVVDIN TADAEELEEL 
PEVGPATAEA IIEYRLANGP FRTVEELEEV PGIGPATLEQ IRPFATV