| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1514 |
|---|
| Symbol | |
|---|
| ID | 4117058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1532515 |
|---|
| End bp | 1533642 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638036308 |
|---|
| Product | chaperone DnaJ |
|---|
| Protein accession | YP_644288 |
|---|
| Protein GI | 108804351 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCG GAAAGCGCGA CTACTACGAG GTTCTGGGCT TGTCCCGGGA CGCCTCGGAG
CAGGACATAA AGCGGGCCTA CCGCCGGCTG GCCCGGAAGT ACCACCCCGA CGCAAACCCC
AACGATCCCG AGGCCGAGGA GCGCTTCAAG GAGCTGAACG AGGCCTACGA GGTGCTCTCC
AACCCCGAGG CCCGGCGCGC CTACGATACC TACGGACACC AGGTGCCGAG CGGCGCGTCG
GGGCGTCCCG GCGGCGACCC GTTCGGCGGC TTCCAGGACA TCTTCGAGGC CTTCTTCGGC
GACCGCTTCG GGGACCCGTT CTTCGACCTC GGGCGCCGCA GGCAGCCCTC GCGCGGGGGC
GACACCGAGG CCGAGGTCGA GATCAGCCTG GAGGAGGCCG CCTTCGGCAC TGAACGTGAG
GTTCAGGTGC AGACCATACG GAACTGCCCG GCGTGCGACG GGGCTGGCGG GACGGAGACC
AGGCTGTGCG GGGCCTGTGG CGGGAGCGGC GTTGTACGGA CGGTAAGGGA GACGCTGCTC
GGGCAGGTGA TGCACCAGCA GACGTGCTCG GCCTGCGGGG GCAGCGGCCG GGTGGTGGTC
GACCGCTGCC GGGAGTGCCG GGGGAGCGGC CGGGTCTCCG AGGTGGTGGG CCGCAGGATC
AGGATACCGG CCGGCATAGA GGACGGGATG CGGCTGCGCG TGCCCGGCTG GGGGCACGCC
GGGGAGCCCG GTGCCTCCTC CGGGGACCTG TACGTGAAGA TAAGGGTGAA GGAGCACCCG
GAGCTGATGC GGGATGGGGA GGATCTCATC CACCGGGCGA GCGTGACGTT CGTGCAGGCG
GCTCTGGGGA CGGAGGTGGA GGTTCCCACG CTGGAGGGGA CGGAGACGGT CAGGATAGAG
CCGGGGACGC AGCCCGGCAC GACGCTCGTG CTCCGGGGCG AGGGGATGCC CAGGATGCGG
GGCGTGGGCC GCGGGGATCT CAAGGTGGTC GTCGACGTGA TGGTTCCGAC GCGGCTCACG
GGCGAGCAGC GGAAGCTTCT GGAGAGGTTC GAGGCGGCCA GCGGGGAGGA GACCTACAAC
GGCCGTTCCG GGTCCTTCTT CGACCGCCTC AGGGGTGTCT TCAGGTAG
|
|---|
| Protein sequence | MPAGKRDYYE VLGLSRDASE QDIKRAYRRL ARKYHPDANP NDPEAEERFK ELNEAYEVLS
NPEARRAYDT YGHQVPSGAS GRPGGDPFGG FQDIFEAFFG DRFGDPFFDL GRRRQPSRGG
DTEAEVEISL EEAAFGTERE VQVQTIRNCP ACDGAGGTET RLCGACGGSG VVRTVRETLL
GQVMHQQTCS ACGGSGRVVV DRCRECRGSG RVSEVVGRRI RIPAGIEDGM RLRVPGWGHA
GEPGASSGDL YVKIRVKEHP ELMRDGEDLI HRASVTFVQA ALGTEVEVPT LEGTETVRIE
PGTQPGTTLV LRGEGMPRMR GVGRGDLKVV VDVMVPTRLT GEQRKLLERF EAASGEETYN
GRSGSFFDRL RGVFR
|
|---|
| |