Gene Rxyl_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1513 
Symbol 
ID4117057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1531762 
End bp1532490 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content75% 
IMG OID638036307 
Producthypothetical protein 
Protein accessionYP_644287 
Protein GI108804350 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.680118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAGGG TCTTTCTGGG GGAGCGTCTG GAGGCCGGGG GGCGGTTCGT GCTGCCGCGG 
GAGGAGGACC ATCACCTGCG CAGGGTGCTT CGCGCCGGCC CGGGGGAGCG GTTCGAGGCC
GTGGATGCGG CCGGAAGGCT CTTCATGGCC GAGCTGCGGG AGGGAGCCTC CGCCGAGGCG
GTCGAGCTTC TGCGCGAGGC GGGCGCCGAG GAGCGGGCCG AGGTGTGGCT CTACCAGGCC
GTTCCCAAGG GCAAGCGGAT GGACCTCGTG GTCGAGAAGG CGACGGAGGT CGGGGTCGCC
GGGATCGCGC CGCTCGTCTG CGAGCGGTCG GTGGTCCGGC CCGGGGACAA CAAGGTGGAG
CGCTGGCGCC GGATAGCGGA GTCGGCGGCC CGGCAGGCGC TGCGGCTGCG GGTTCCCGAG
GTGAGGGAGC CGGTCGCCTT CCGGGAGGCC GTGCGCGAGG TGGGGGGGCG CGGGGTGCTC
TTGCACAACG GCCCCGGCCT CGACCCCCTG GAGGAGCGGG CGCGCGGCGC CGTCGCGCTG
CTGGTCGGCC CCGAGGGGGG GTGGAGCGGT GCCGAGATAG AGGAGGCGCT CCGGTGCGGG
CTCTCGCTGG CGCAGCTCGG GCCCTTCAGG CTGCGGAGCG AGACCGCCGG GGTGGTGGCG
GTGGCCCGGA TGCGGGCCGT GTTGGAGAAT GGGCAGGGCA CGGAGAGGAG CGAGGAGTTG
CGCGGATGA
 
Protein sequence
MTRVFLGERL EAGGRFVLPR EEDHHLRRVL RAGPGERFEA VDAAGRLFMA ELREGASAEA 
VELLREAGAE ERAEVWLYQA VPKGKRMDLV VEKATEVGVA GIAPLVCERS VVRPGDNKVE
RWRRIAESAA RQALRLRVPE VREPVAFREA VREVGGRGVL LHNGPGLDPL EERARGAVAL
LVGPEGGWSG AEIEEALRCG LSLAQLGPFR LRSETAGVVA VARMRAVLEN GQGTERSEEL
RG