| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1492 |
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| Symbol | |
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| ID | 4117016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1510307 |
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| End bp | 1511650 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638036284 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_644266 |
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| Protein GI | 108804329 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGTGC ACATGATCGG GGTCGGCGGC GCGGGCATGA GCGGCATCGC CGAGGTGCTG
GCGCGCAGGG GACACGAGGT GACGGGCTCC GACCTCAAGG AGTCGCCCTA CACCCGCAGG
CTCGCGGCGG CCGGGGTGAA GGTGTACATC GGGCACGAAG CCCGGCAGGT CGGCGACGCG
GAGGTGGTCG TCATCTCCAC CGCCATCCCC AAGACCAACC CGGAGCTTCT GGAGGCGCGC
CGCAGGTCCA TCCCGGTGAT CCCCCGGGCG GAGGCGCTGG CCAGGATCCT GGCCGAGGGC
CGCGGGATCG CCGTGGCCGG AACCCACGGC AAGACCACCA CCACCAGCAT GATCGCCCAC
TCCCTCAGGG CGCTCGGCGA GAACCCCACG GCCCTCGTCG GCGGGGAGCT GAACGACATC
GGGAGCAACG TGATCTTCGG GCGCGAAGAC CTGATCGTCG CGGAGGCCGA CGAGAGCGAC
CGCTCGATCC TGCGGCTGCA TCCCCAGGCC GCCGTGATCA CGAACATCGA GTACGACCAC
CCGGACTTCT ACGCCTCGCT GGAGGAGGTG GTGGAAACCT TCGCCCGGTT CGTCGCCGGA
CTGCCCCCCG AGGGGCACCT CGTCCTGTGC GCCGACGACC CGCGCTGCCG GAGGCTGGCG
GAGCTGGCCC CCTGCCCGGT CACGACCTAC GGCCTCTCCG GCGGCGAGCT GCGGGCGCGG
GTGCTCTCGC CCGGCTCCTA CCTTCTCTTC GAGGGCGCAC GAAAGCGGGG CGAGGTGAGC
CTCGGCGTCT ACGGCCGGCA CAACGTCCTG AACTCGCTCG CCGCCGCAGG CATAGCCCGG
TGGCTGGGCC ACGACCCGCT CGAGGCAGCC CGGACGCTCG GCAGCTTCGG CGGCGTGCGG
CGCAGGTTCC AGCTCAAGGG CGAGCGCTCC GGCGTCCGCG TGGTGGACGA CTACGCCCAC
CACCCCACCG AGATAATGGC CATCCTCGAC GTGGCGCGGG CCACCGCGGC CCCGGAGGGC
CGGATCATCG CGGTCTTCCA GCCCCACCGC TACTCGCGCA CCCGCAAGCT CTACCGGGAG
TTCGGCCGGG CCTTCGGGCG GGCCGACGCG GTGGTGGTGA CCGAGGTCTA CGGGGCCGGC
GAGATGCCGC AGCCGGGGGT GAGCGGCAAG CTGGTCGTGG ACGCCATCTG CGAGACTTCG
GACCGGCCGG AGGTCTACTA CGTGCCGGAC CAGGAGGCCC TCCCTGAGGT GCTGCGCATG
ATCTCCGGCC CCAGAGACAC CGTGATCACG CTCGGCGCCG GAGATATCTC CCGCGCCGGC
GAGGAGCTGC TCGCCCGGCT TTGA
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| Protein sequence | MKVHMIGVGG AGMSGIAEVL ARRGHEVTGS DLKESPYTRR LAAAGVKVYI GHEARQVGDA
EVVVISTAIP KTNPELLEAR RRSIPVIPRA EALARILAEG RGIAVAGTHG KTTTTSMIAH
SLRALGENPT ALVGGELNDI GSNVIFGRED LIVAEADESD RSILRLHPQA AVITNIEYDH
PDFYASLEEV VETFARFVAG LPPEGHLVLC ADDPRCRRLA ELAPCPVTTY GLSGGELRAR
VLSPGSYLLF EGARKRGEVS LGVYGRHNVL NSLAAAGIAR WLGHDPLEAA RTLGSFGGVR
RRFQLKGERS GVRVVDDYAH HPTEIMAILD VARATAAPEG RIIAVFQPHR YSRTRKLYRE
FGRAFGRADA VVVTEVYGAG EMPQPGVSGK LVVDAICETS DRPEVYYVPD QEALPEVLRM
ISGPRDTVIT LGAGDISRAG EELLARL
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