| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1481 |
|---|
| Symbol | |
|---|
| ID | 4116147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1501654 |
|---|
| End bp | 1502208 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638036273 |
|---|
| Product | Uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_644255 |
|---|
| Protein GI | 108804318 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0265739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAT TAGGCTTCGG CGAGCGCGTC CGCGCTTGCG TACTCACCGG CGACCAGATC
TCCCGCTCCC TGCGGCGCAT CTCGCACGAG ATCCTGGAGC GCAACGCCTC CTCCCTCGAG
GAGCTGGCGT TGGTGGGGAT CCTCACCCGC GGCGTGCCCC TGGCGCACCG GATCGCGGGG
AACATCCGGC GCTTCGAGGG GCTGGAGGTC CCGGTGGGGG CGCTGGACAT CACGCTGCAC
CGGGACGACC TGGACGGGGA GGACCCGGAG GTGAAGGGCA GCCACATCCC CTTCGAGGTG
GCGGGCAGGA CCGTCGTCAT GGTGGACGAC GTGCTCTTCA CCGGCAGGAC GGCCCGGGCG
GCGATGGATG CCCTCCTGGA GAGGGGGCGC CCGGCGGCGA TCCAGCTCGC CGTCCTGGTC
GACCGCGGGC ACCGGGAGCT GCCCATCCGG GCGGACTACG TGGGCAAGAA CATCCCGACC
TCCCTCGGCG AGAGCGTGCG GGTCGGGCTT GTGGAGACCG ACGGAGAGGA CGGGGTGGTC
GTCGTTGGGA GCTAG
|
|---|
| Protein sequence | MSRLGFGERV RACVLTGDQI SRSLRRISHE ILERNASSLE ELALVGILTR GVPLAHRIAG
NIRRFEGLEV PVGALDITLH RDDLDGEDPE VKGSHIPFEV AGRTVVMVDD VLFTGRTARA
AMDALLERGR PAAIQLAVLV DRGHRELPIR ADYVGKNIPT SLGESVRVGL VETDGEDGVV
VVGS
|
|---|
| |