Gene Rxyl_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1466 
Symbol 
ID4116132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1485611 
End bp1486321 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID638036258 
Producthypothetical protein 
Protein accessionYP_644240 
Protein GI108804303 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0046355 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCGGTG CTAAACTGCC CGGAACGCGA GGAGGGGGGC GCGAGATCTT CGGTCCGGAA 
CTAGCCGCCG GCATGTCGCA GCCCGAGGCC GAGGCCCGGG GCATAGACTT CGAGGAGGAG
ATGCGGCTCG CCATAGTCGG GGCGGGCGGC TACGGGCGCC TCGCGCTCGA CGTTCTCATC
GCCGCCGGCA TCTCGGACAG GGTCCTCGGC TTCTACGACG ACGCGCACGC CGTGCTCCCC
GAGAAGGTGC GCGGCTTCCC CGTGCTGGGG GACATAGGCA TGCTCAAGAG CATGCTCTCC
GTCGAGCCCG TGCACGTCAT CGTCGCCATA ACGGACAACC GGACCCGCCT CTCCATCGCC
AACTCCATCC GGGCCCTCGG GGGGAGCTTC TTCACCGCCG TCCACCCCGG GGCCTACGTC
TCCGGGGCCG CGATGGTCGG CGACGGGTCC GTGCTCGCCG CCGGGGCCGT CGTCCACCCG
AACGCCGTGG TCGGCAGCCA CAGCTTCATC GGGCCGGGGG CGCTCGTGGA CCGCGACGCC
GAGGTCGGGG CGGGGGTCTG GCTCTCGGCC GGCTCCGTGG TGGGGCCCGG GGCCCGCGTG
GGGGCGCGGG TCCTGCTGGG CTTCAACTCC GGTGTGGGCC GCAAGGCCTC CGTGGGGAGC
GACACCGAGG TGGGGCCGCT GCGCTACGTT GCCCGGGAGG GCGGCGGTTG A
 
Protein sequence
MCGAKLPGTR GGGREIFGPE LAAGMSQPEA EARGIDFEEE MRLAIVGAGG YGRLALDVLI 
AAGISDRVLG FYDDAHAVLP EKVRGFPVLG DIGMLKSMLS VEPVHVIVAI TDNRTRLSIA
NSIRALGGSF FTAVHPGAYV SGAAMVGDGS VLAAGAVVHP NAVVGSHSFI GPGALVDRDA
EVGAGVWLSA GSVVGPGARV GARVLLGFNS GVGRKASVGS DTEVGPLRYV AREGGG