Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1466 |
Symbol | |
ID | 4116132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1485611 |
End bp | 1486321 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638036258 |
Product | hypothetical protein |
Protein accession | YP_644240 |
Protein GI | 108804303 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0046355 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGCGGTG CTAAACTGCC CGGAACGCGA GGAGGGGGGC GCGAGATCTT CGGTCCGGAA CTAGCCGCCG GCATGTCGCA GCCCGAGGCC GAGGCCCGGG GCATAGACTT CGAGGAGGAG ATGCGGCTCG CCATAGTCGG GGCGGGCGGC TACGGGCGCC TCGCGCTCGA CGTTCTCATC GCCGCCGGCA TCTCGGACAG GGTCCTCGGC TTCTACGACG ACGCGCACGC CGTGCTCCCC GAGAAGGTGC GCGGCTTCCC CGTGCTGGGG GACATAGGCA TGCTCAAGAG CATGCTCTCC GTCGAGCCCG TGCACGTCAT CGTCGCCATA ACGGACAACC GGACCCGCCT CTCCATCGCC AACTCCATCC GGGCCCTCGG GGGGAGCTTC TTCACCGCCG TCCACCCCGG GGCCTACGTC TCCGGGGCCG CGATGGTCGG CGACGGGTCC GTGCTCGCCG CCGGGGCCGT CGTCCACCCG AACGCCGTGG TCGGCAGCCA CAGCTTCATC GGGCCGGGGG CGCTCGTGGA CCGCGACGCC GAGGTCGGGG CGGGGGTCTG GCTCTCGGCC GGCTCCGTGG TGGGGCCCGG GGCCCGCGTG GGGGCGCGGG TCCTGCTGGG CTTCAACTCC GGTGTGGGCC GCAAGGCCTC CGTGGGGAGC GACACCGAGG TGGGGCCGCT GCGCTACGTT GCCCGGGAGG GCGGCGGTTG A
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Protein sequence | MCGAKLPGTR GGGREIFGPE LAAGMSQPEA EARGIDFEEE MRLAIVGAGG YGRLALDVLI AAGISDRVLG FYDDAHAVLP EKVRGFPVLG DIGMLKSMLS VEPVHVIVAI TDNRTRLSIA NSIRALGGSF FTAVHPGAYV SGAAMVGDGS VLAAGAVVHP NAVVGSHSFI GPGALVDRDA EVGAGVWLSA GSVVGPGARV GARVLLGFNS GVGRKASVGS DTEVGPLRYV AREGGG
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