| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1442 |
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| Symbol | |
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| ID | 4117240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1464836 |
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| End bp | 1465546 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638036234 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_644216 |
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| Protein GI | 108804279 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000380815 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGG TGCGGCTGCA GGCCTTTCTC GCCCGCTCCG GCGCCGCCCC CTCCCGCCGC
AAGGCGGAGG AGATGATCCG GGCCGGCCGC GTCCGGGTGA ACGGCCGGGT CGCCTCCCTG
GGGGAGAGGG TGGACCCCTC CTCCGACCGC GTCTCTCTGG ACGGCCGGAG GGTGGAGCCC
CCATCCGGCT ACGCCTACTA CGCCCTCCAC AAGCCCCGCG GCTACCTGAC GACCATGCGC
GACGACTTCG GGCGGCGCAC GGTGGCCTCC CTCATGCCCC GGATACCGGG GCTCGTCCCC
GTCGGCCGGC TGGACAGGGA CACCTCCGGC CTGCTGCTGC TGACGAACGA CGGCCGGCTG
GCGCACCGCA TCGCCCACCC CTCCTCGCGG GTGGAGAAGG AGTACGAGCT GGTCGTCCGC
GGCGACCCCC CGCAGGAGGC CCTCCGGCGC CTGGCCGCGG GCCCCACCCT CGAGGACGGG
CCGATGCTCC CCCCGCGCCT CTCGCACCTG CGCCGCGGCC CCCGCGCCAC CACCTTCCAC
CTCACCATCC ACGAGGGCCG CAAACGCATA ATACGCAGGG CCTGCGCCGC GACCGGCCTG
GAGCTGCTCT CCTTGCGCCG GGTCCGGGTG GGGCCGGTGC TGCTCGGGGA TCTTGCGCCG
GGGCGGTACC GGCCGCTGAG CGAGGAGGAG CTGGAGGGGC TCGGGCGGTG A
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| Protein sequence | MSAVRLQAFL ARSGAAPSRR KAEEMIRAGR VRVNGRVASL GERVDPSSDR VSLDGRRVEP
PSGYAYYALH KPRGYLTTMR DDFGRRTVAS LMPRIPGLVP VGRLDRDTSG LLLLTNDGRL
AHRIAHPSSR VEKEYELVVR GDPPQEALRR LAAGPTLEDG PMLPPRLSHL RRGPRATTFH
LTIHEGRKRI IRRACAATGL ELLSLRRVRV GPVLLGDLAP GRYRPLSEEE LEGLGR
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