| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1405 |
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| Symbol | |
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| ID | 4116482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1426712 |
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| End bp | 1427749 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638036197 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_644179 |
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| Protein GI | 108804242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCC TCGTCGCGCT GCTCGGCCTG ATCTTCCTGA TCGCCATACA CGAGCTGGGC
CACATGCTCA CCGCCAAGGC CCTCGGCGTG CGGGTCCCGG AGTTCGGTAT CGGCTTCGGC
CCCGCCCTCT TCAAGAAGAA GCTCGGCGAT ACCACCTACT CTTTCCGCAT AATACTCCTG
GGCGGGTTCG CGAGGATCGC GGGGATGGGC GACGGGCGCA CGGGCCCGGG CACCTACTAC
GAGAAGCCTG CCTGGCGGCG GGCCCTGATC ATCTTCGCCG GCCCGTTCGC GAACATCCTG
GCGGCGGTGC TCATCCTCAC GGCGATCTTC ATGGGGGCCC ACGAGCCCTC GATGACGGTG
GAGCGGGTGG TGCCCGGCTC CTTCGCCGAC GAGGCCGGGG TGAAGAAGGG GGATCGGATC
GTCGCCGTGG ACGGACGGCG GGTGGAGAGC TGGGACGCCT TCGTAGGCGC CGTCGGGGAC
AAGCGGCCCG GCGACCCGGT CCGGCTCGTG GTCCGGCGGG ACGGGGAGCC AAAGGTGTTC
GCCGGGGAGC TCAAGGCCGA CCCCCGCGAC CCCGAGCGGG CGCTCGTGGG GGTGCAGCCC
GCCCCCTCCG GGCAGACCTA CGGCGTGCTC GAGGCCTTCG GGATGGCGGT CGGGCGGGTG
GTCGAGATAA CCAGGCTGCT CGGGGTCTTC CTCTGGCAGC TTCTCACCGG GGAGCAGAGC
CTCTACCAGA ACGTCACCGG CCCCGTGGGG ATCGTCTCCG TCAGCAGCCA GTCCGTGGAG
CAGGGGTTCT TCCCAGTGCT TCTGGCGTTC ATAAGCCTCA ACCTCGCGCT CTTCAACCTG
CTCCCCATCC TCCCGCTCGA TGGGGGGCAC CTGCTCTTTC TCGCCGTCGA GAAGGTCATC
CGCAAGCCCG TCAGCGAGGA GACCATGAAC AGGGTGGCGA TCGTCGGGCT GATGTTAGTC
TTAACACTCT TTTTATTCGC AACCTATGCG GACCTTAGTA AAATCTTCTC CGGGGAGCCC
TTCATCCCCG ACCGCTGA
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| Protein sequence | MTVLVALLGL IFLIAIHELG HMLTAKALGV RVPEFGIGFG PALFKKKLGD TTYSFRIILL
GGFARIAGMG DGRTGPGTYY EKPAWRRALI IFAGPFANIL AAVLILTAIF MGAHEPSMTV
ERVVPGSFAD EAGVKKGDRI VAVDGRRVES WDAFVGAVGD KRPGDPVRLV VRRDGEPKVF
AGELKADPRD PERALVGVQP APSGQTYGVL EAFGMAVGRV VEITRLLGVF LWQLLTGEQS
LYQNVTGPVG IVSVSSQSVE QGFFPVLLAF ISLNLALFNL LPILPLDGGH LLFLAVEKVI
RKPVSEETMN RVAIVGLMLV LTLFLFATYA DLSKIFSGEP FIPDR
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