Gene Rxyl_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1388 
Symbol 
ID4116466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1414383 
End bp1414640 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content67% 
IMG OID638036181 
ProductSSU ribosomal protein S16P 
Protein accessionYP_644163 
Protein GI108804226 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0159057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTAA AGATCAGGCT CGCAAGGCAC GGGGCCAAGG GCAAGCCCTT CTACAGGATC 
GTGGTGGCCG ACGCGCGCAG CCCGCGCGAC GGCAAGTTCA TAGACCGGGT CGGCACCTAC
GACCCGCGCA AGGAGCCCTC GGAGATAAAG GTGGACGCCG AGAAGGCGCG GGAGTGGCTC
CGCAAGGGCG CCCAGCCCAC CGACCAGGTG CGGAACCTGC TCAGGATCTC CGGGGTGCTG
GAGGAGCAGA AGGGGTAG
 
Protein sequence
MAVKIRLARH GAKGKPFYRI VVADARSPRD GKFIDRVGTY DPRKEPSEIK VDAEKAREWL 
RKGAQPTDQV RNLLRISGVL EEQKG