Gene Rxyl_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1366 
Symbol 
ID4117185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1393479 
End bp1394681 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID638036159 
ProductGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_644141 
Protein GI108804204 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.621964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTTA GCCCGGTAGA GGAGATCATC GAGGAGATAA GAGCGGGCAG GATGGTCATC 
GTCTGCGACG ACGAGGACCG CGAGAACGAG GGCGACCTCA CCGTAGCGGC CGAGCTTGTC 
ACCCCAGAGC ACATCAACTT CATGGCCAAG TACGGCCGCG GCCTCATCTG CCTGCCCATG 
GCGCAGGAGC TCATAGAGCG GCTTGAGATC CCCGAGATGG TGCGCCACAA CTCCTCCAGG 
ATGGGCACCG CCTTCACGGT CTCCATAGAG GCCAGGGAGG GGATCTCCAC GGGCATCTCG 
GCGGCCGACA GGGCGCACAC CTGCAGGGTT GCGGTCTCTG ATGAGGCGGG GCCTGAGGAC 
ATAGTGATGC CGGGGCACGT CTTTCCCCTC AAGGCCAGGA AGGGAGGGGT CCTGCAGCGT 
CCTGGGCAGA CGGAGGCTGC GGTGGACCTG GCGCGCCTTG CGGGGTTGAA GCCTGCTGGG 
GTGATCTGCG AGGTGATGAA GGACGACGGG ACGATGGCCA GGGTGCCTGA CCTCGAGCGT 
TTCTCTGCGG AGCACGGCAT AAAGATGGTC ACCGTAGCCC AGATCATCGA GTACCGCCGG 
GCCTACGAGA CCCAGGTGCG CTGCGCCGCC CAGACCCGCC TGCCGACGCC CTTCGGGGAG 
TTCCGGCTGA GGGCCTACGA GAACGACGTC GACGAGCTCA CCCACCTGGC GCTCATCATG 
GGCGAGCCCG AGGGCAAGGA GGACGTCCTG GTCAGGATCC ACTCCGCCTG CCTGACGGGG 
GACGCGCTGC ACTCCCTGCG CTGCGACTGC GGGGAGCAGC TGAGGGCCTC CATGGAGCGC 
GTCGCCGCCG AGGGCGAGGG GGTCATCGTC TACATGCAGC AGGAGGGCAG GGGCATAGGG 
CTCCTGAACA AGATGAAGGC CTACCACCTG CAGGACGAGG GGCTCGACAC CGTGGAGGCC 
AACCAGAAGC TGGGGCTCGC GCCGGACCTG AGAGACTACG GGATAGCCGC CCAGATCCTC 
AAGGACCTCG GCCTGGAGAG GATCCGCCTG CTCACCAACA ACCTCACGAA GGTGGTGGGG 
CTGCAGGGCT TCGGGCTCAC CATCGGCGAG CGCATCCAGA TAGAGGTGCC CCCCAACGGC 
CACAACGAGC GCTACCTGAG GACGAAGCGC GAGAAGCTCA ACCACCTCCT CAGGGAGGTC 
TGA
 
Protein sequence
MPFSPVEEII EEIRAGRMVI VCDDEDRENE GDLTVAAELV TPEHINFMAK YGRGLICLPM 
AQELIERLEI PEMVRHNSSR MGTAFTVSIE AREGISTGIS AADRAHTCRV AVSDEAGPED 
IVMPGHVFPL KARKGGVLQR PGQTEAAVDL ARLAGLKPAG VICEVMKDDG TMARVPDLER 
FSAEHGIKMV TVAQIIEYRR AYETQVRCAA QTRLPTPFGE FRLRAYENDV DELTHLALIM 
GEPEGKEDVL VRIHSACLTG DALHSLRCDC GEQLRASMER VAAEGEGVIV YMQQEGRGIG 
LLNKMKAYHL QDEGLDTVEA NQKLGLAPDL RDYGIAAQIL KDLGLERIRL LTNNLTKVVG 
LQGFGLTIGE RIQIEVPPNG HNERYLRTKR EKLNHLLREV