| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1358 |
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| Symbol | |
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| ID | 4117177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1384972 |
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| End bp | 1385748 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638036151 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_644133 |
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| Protein GI | 108804196 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.317901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCG GCTACCCGCG GCCCGACAAG GCGCGGACCC GGCGGCTCCT GGAGCGCTAC
CACCGGGAGG GGGACCGGCA GGCCAGGGAG CAGGTGATCC AGGAGCAGCT GCCGCTCGCC
GAGTTTCTGG CGCGCAAGTT CGCCGGCCGC GGGGAGCCGC TGGAGGACCT CGTGCAGGTG
GCCTCCGTGG GCCTCATAAA GGCCGTGGAC CGCTTCGACG TGGACAGGAA CATCGAGTTC
TCCACCTACG CCACGCCCAA CATCCTGGGC GAGATAAAGC GCCACTTCCG GGACAAGGGG
TGGGCCATGC GGGTGCCGCG GGGGCTGCAG GAGCTGCGCC AGGCGGTCAA GGAGGCCATC
CGGGAGGAGA CGGTCAGGAC CGGCCGCTCG CCGACGATGG ACGAGCTCGC CGAGCGGCTG
GACACCGACG TGGAGAGCGT GGCCGAGGCG CTCACGCTGG GCCGGGCGTA CAACACCACC
AGCCTGGACG CCCCCATAAG CCAGGACGAC GCCGAGGGGG ACACCATCAT GGACCTGCAG
GCCGACGAGA ACCAGCCCAT AGAGGGCATA GAGGACAAGC TGCTGCTGCA GGAGGCCATG
CGGGGGCTGC GCGAGCAGCA GCGGGAGATC CTGCGGCTGC GGTTCAACGA GGGGAAGACC
CAGACCGAGA TCGCCGAGCG CATCGGGGTG AGCCAGATGC ACGTCTCCCG CCTGTTGCGG
CGGGCGATCG CCGACCTGCG GCGCTCGCTC TCCGAGATGG AGCGCGAGCG GCACTAG
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| Protein sequence | MSGGYPRPDK ARTRRLLERY HREGDRQARE QVIQEQLPLA EFLARKFAGR GEPLEDLVQV
ASVGLIKAVD RFDVDRNIEF STYATPNILG EIKRHFRDKG WAMRVPRGLQ ELRQAVKEAI
REETVRTGRS PTMDELAERL DTDVESVAEA LTLGRAYNTT SLDAPISQDD AEGDTIMDLQ
ADENQPIEGI EDKLLLQEAM RGLREQQREI LRLRFNEGKT QTEIAERIGV SQMHVSRLLR
RAIADLRRSL SEMERERH
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