| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1343 |
|---|
| Symbol | |
|---|
| ID | 4116030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1370144 |
|---|
| End bp | 1371712 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 638036137 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_644119 |
|---|
| Protein GI | 108804182 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0725214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCC CCGCTCCCCA CCCGGCGCTG CGCGTCTGCG TCGTCGTCCC GGCGCGCAAC
GAGGAGGACG GGATCGGGGC GTGCCTGCAC GCCCTCGCCC GCCAGAGAGG GGTGCGGCCG
GAGGAGTACG AGGTGCTCCT GGTGCTCGAC GCCTGCACGG ACGCGACCGC CGAGCGGGCG
CTCGCGGCGG CCGCGGAGCA CCCCCGGCTG CGGCTGCACC TGCTGCGGGG GCCGGGCAGG
GGGGCCGGGC ACGCGCGCCG GGTGGGCATG GAGGCCGCCT GCCGGCGGCT GCTCCGGGTG
GGGAGGCCGG GGGGTCTGAT CTCCTCTACC GACGCGGACA CGGTGGTCGC CGGCGACTGG
ATCGCCGCCC AGCTCGCCGC CGCCGCGGGC GGCGCCCGGG CGATCGGCGG CAGGATAGAG
CTCGGGGAGG GGAGCGGAGA TCTCCCGGCG GGGGTGGCCC GCTGGAGGGA GGAGCACGGG
AGCCCCGGGC TCCGGGGGCG CTTCAGCGGC GCCTCGATGG CCCTCACCGC CGAGGCCTAC
CGCCAGGTCG GCGGGCTCGC GCCCCGGGCG GCGCTGGAGG ACGAGCACCT GGAGCGGCTC
CTGGTGCAGC GCGGCATCAG CATCGCGCTC CCGGAGGGCG TCCGGGTGCG CACCTCGGCC
CGCACCGCGG GGCGGGCGCC GAGGGGTCTG GCGCGCGACC TGGCGCTGGC CTCCTGGTTC
GAGCGGAACA CCTACGGCGC ATCGGAGGCG GCGGGAGCGC CCGCAGGGCG GAGCACGGGG
GCCGTGCTCT ACTCCGCCCG CGGGGCCGCA CACGCCGCGG CGGCGGCCGC CGAGCTGCTG
GAGGCGGGCC TCGCGCGGTG GGCGACGCCG GTGGGGCCCG ACGGGCCGGA AGATACCCCC
GAAGGCTTCG GGCCGGTGCG GGGGTTCGGG GACGCCCTCT GGCGCGGGCT CGCCGCGACC
CCCGGCGAGA CGCTCGTGTT CCTCGACGCG GAGGCGGCGG GCGCCCGGGA GCGGGCCCGC
GCCCTGCTCT CCCCGCTCGC GGCGCGGAGC GGGCTGCGCC TCGCCTGCGG CTTCCGCGAC
CCCGGCGCGG GGCGTCCCGC GCCGGTCGCG GTGCGCTCCC TCCTGAACCT CTACCTCCCG
GAGGCGGCCG GGTTCGTGGA CCCGAACCCC TCCGAGTTCG CCGCCCGGAG GGCTCTGCTC
GAGGAGCTGC CGTTCCCGGC CGGGCCCGGG GTGGGCGCCG GGCTGCTGGT GGATGCCGTC
CGGCGGGAGG GGGTGGAGGC CGTCGCGCAG GTCCGGCTGC GTGGCGCGCC CGGGAGCAGC
GAAGACCCCG AGGAGACGGC CTACGCCGCG CTCGCCGCCG CGCTCTTCCG GCTGGGCGCG
GGCGACCCGG AGGAGCTCTC GCCCGGACAG CTCTTCCGGG CCTCCCCCGA GGGGCTGCGG
CGCAGCGGCG TGGCGGTCGA GGAGCGCCCC CCGCTCAGGA GGGCGGGGGG CGGGAGGGGC
CTTCCAGCGG CCGGCCGCAG TGGGGGCAGA CGCGCCCCTC CTCCCTGCTC CGCCGGATCT
CCTCCATGA
|
|---|
| Protein sequence | MSLPAPHPAL RVCVVVPARN EEDGIGACLH ALARQRGVRP EEYEVLLVLD ACTDATAERA
LAAAAEHPRL RLHLLRGPGR GAGHARRVGM EAACRRLLRV GRPGGLISST DADTVVAGDW
IAAQLAAAAG GARAIGGRIE LGEGSGDLPA GVARWREEHG SPGLRGRFSG ASMALTAEAY
RQVGGLAPRA ALEDEHLERL LVQRGISIAL PEGVRVRTSA RTAGRAPRGL ARDLALASWF
ERNTYGASEA AGAPAGRSTG AVLYSARGAA HAAAAAAELL EAGLARWATP VGPDGPEDTP
EGFGPVRGFG DALWRGLAAT PGETLVFLDA EAAGARERAR ALLSPLAARS GLRLACGFRD
PGAGRPAPVA VRSLLNLYLP EAAGFVDPNP SEFAARRALL EELPFPAGPG VGAGLLVDAV
RREGVEAVAQ VRLRGAPGSS EDPEETAYAA LAAALFRLGA GDPEELSPGQ LFRASPEGLR
RSGVAVEERP PLRRAGGGRG LPAAGRSGGR RAPPPCSAGS PP
|
|---|
| |