| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1212 |
|---|
| Symbol | |
|---|
| ID | 4116274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1232857 |
|---|
| End bp | 1234167 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 638036002 |
|---|
| Product | di-myo-inositol-1,3'-phosphate-1'-phosphate synthase / CTP:L-myo-inositol-1-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_643990 |
|---|
| Protein GI | 108804053 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase
[COG1213] Predicted sugar nucleotidyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACG AGCGTACCAC GGGGCGGGAG GGCGTAGGCG CGGCGGTGCT GGCCGCGGGG
TTCGGGGAGC GGCTGCGGGA GTGCGGGCGC CCCAAGCCCC TCGCGCGGGT CGCCGGGCTC
ACGCTGCTGG AGCGCACGGT GCGGACGCTG CGGGCGGGGG GGCTGGAGGG CGAGATAGTC
GTCGTGGTCG GCCACCGGGG GGAGGAGGTG GCCGGGCACT GCAAGGCGCG CGGGCTGCCG
GTGCGGGTGG TCGAGAACCC GGACTACCCG CGGGGCAACG GCACCTCCGT GCTGGCGGCG
ATGCGGTTTC TGCCGGAGCG GTTCGTGGTG GCCATGGTGG ACCACATCCA CACCCCGGAG
TCGGTGCGGC GGCTGCTGCG GTGCGAGGGG GACTTTGTGG CGGCGGTGGA CACCCGGCCG
GTGTACGCCG ACCCCGGGGA GGCCACGCGG GTGCGGCTCG AGGGCGGCAG GGTGGTGGAG
TTCGGGAAGA ACCTGCCCCG GTACGACGGG CTGGACGCCG GGCTGTTCCT GTGCTCCCGC
CCGGCGCTAG AGCGCCTGCG GGAGGCTTCC GGGGGGGAGA GGCTCTCCTG GAACGACCTC
AAGCGGGCCT GGCTCGCCTC CGGAGGGGAG GTGGTGGCCT GCGACCTCGC CGGGGCGCCG
TGGACCGACG TGGACACCCC GCAGGATCTG CGGCTCTCGG AGGAGATGGT GCTGGGGTGG
GCCGCGAGCG GGAACGACGG CCCCGTCTCC CGCCACATCA ACCGGCGGAT CAGCCGCAGG
ATCACCCGCC GGCTCCTCGA CACCCCGCTC TCGCCCGACC AGGTCAGCCT GCTGAGCTTC
GCCCTGGCGG CGCTCGGGGC CGGCCTGCTG GCCGCCGGGC GCCTCAGGCT CGGGGGGGCG
CTGGTGCAGC TCGCCTCCAT CGTGGACGGC TGCGACGGTG AGCTGGCCCG CGCCCGGCTG
GAGTCCTCCC CGCGGGGGGC CGTCTTCGAC GCCACGCTCG ACCGCTGGGC CGACGCGCTC
ATCATCTCCG GGCTGGCCCT GGGGGCCGGG ACCCGCCTGG CGGCCGCCGC CGGCTACCCG
GCGCTCGCCG GCGCCCTGCT CGTCTCCTAC ACCCGGGCCC GCTGGGAGGC CGCCCTCGGG
CGGATGCCCT CCCGGTTCAC CGGCCTCGGG GCGACCCGCG ACGTCAGGCT CGCCGTGCTC
GCCCTCGGGG GGCTGCTCGG GGCGCCGGGA GCGGCGCTTC TGGCCACCGG CGCCCTCGGC
AACGCCGAGG CGCTGCGCCG CCTGCTCGCG CTCAAGAGGG GGCGGTCGTA G
|
|---|
| Protein sequence | MPDERTTGRE GVGAAVLAAG FGERLRECGR PKPLARVAGL TLLERTVRTL RAGGLEGEIV
VVVGHRGEEV AGHCKARGLP VRVVENPDYP RGNGTSVLAA MRFLPERFVV AMVDHIHTPE
SVRRLLRCEG DFVAAVDTRP VYADPGEATR VRLEGGRVVE FGKNLPRYDG LDAGLFLCSR
PALERLREAS GGERLSWNDL KRAWLASGGE VVACDLAGAP WTDVDTPQDL RLSEEMVLGW
AASGNDGPVS RHINRRISRR ITRRLLDTPL SPDQVSLLSF ALAALGAGLL AAGRLRLGGA
LVQLASIVDG CDGELARARL ESSPRGAVFD ATLDRWADAL IISGLALGAG TRLAAAAGYP
ALAGALLVSY TRARWEAALG RMPSRFTGLG ATRDVRLAVL ALGGLLGAPG AALLATGALG
NAEALRRLLA LKRGRS
|
|---|
| |