Gene Rxyl_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1197 
Symbol 
ID4116101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1218041 
End bp1218592 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content65% 
IMG OID638035987 
Product4Fe-4S ferredoxin, iron-sulfur binding protein 
Protein accessionYP_643975 
Protein GI108804038 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAAC TCGGACAGGG AATACTGAAG GGCATGGGGA TCACCCTCAA GCACCTCTTC 
GAGAAGAAGA TCACGCGCCA GTACCCCGAG TACAAGCGCG AGATGCCGGA GCGCACGCGC 
GGGATGCTCA CCGTGGACAT GGACCGCTGC ATCTCCTGCC TGCAGTGCAT GCGGGTCTGC 
CCCGACCACT GCATCACCAT AGTGCAGGAC AGGCGCGACG CCGACGGCTC CGGCAAGCCC 
AGGCCGTACT CGATGGGCTT CATGATCGAC GACTCGCGGT GCATGTACTG CGCGCTGTGC 
GTCGAGGTGT GCCCGGTGAA CTGCATCTAC CACACCGAGG AGTTCGAGAT ACAGGCGTAC 
AACCGGCTCG ACCTGGCCCG GCAGTTCGGG GAGCAGGCCG TGGACCCGAC CGTGGACCCG 
AAGCCCGCGG TCAAGATCCC CTTCTCGACG GCGGGCAGAA AGCCCCCCAT CAAGGAGAAG 
AAGAAGCCCA CCGGCAAGAA GGCCCCCGCC ACCGCGGGGC GGCACATCTT CGGGAAGAAC 
CCGGACGGGT GA
 
Protein sequence
MPQLGQGILK GMGITLKHLF EKKITRQYPE YKREMPERTR GMLTVDMDRC ISCLQCMRVC 
PDHCITIVQD RRDADGSGKP RPYSMGFMID DSRCMYCALC VEVCPVNCIY HTEEFEIQAY 
NRLDLARQFG EQAVDPTVDP KPAVKIPFST AGRKPPIKEK KKPTGKKAPA TAGRHIFGKN 
PDG