Gene Rxyl_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1141 
Symbol 
ID4117373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1171749 
End bp1172681 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content74% 
IMG OID638035931 
Productperiplasmic solute binding protein 
Protein accessionYP_643919 
Protein GI108803982 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTGA GGCGGGCGCT TCTCGCGCCG CTGCTCCTCC TCCTGCTCGC TGCGGGGTGC 
GCCGGTTCCT CCGGGGAGGG GGGCGGCGGG CGGCCGGAGG TCGCCGCCAC CACGCCGGTC 
ATAGGGGACC TCGTGCGGCA GGTCGCGGGG GGTCGGGCGG AGGTCTTCGT GCTCGTGCCC 
CCGGGCGCCG AGCCGCACAC CTTCCAGCCG GCGCCGCGCG ACGCGGCCCG CCTCTCCCGC 
GCCGAGGCGG TCTTCAAGAA CGGGCTCGGG CTCGACGACT GGGTGGACGA CCTGATCGAG 
AGCGCCGGCG GGGAGGGGCA GACCGTGGTC GAGCTCTCCC GCGGCCTCGA GCCCGTGGGC 
GCGGAGCACG GCCACCACGA CGAGGAGGAG CACGGCCACC ACGGCGGGCA CGCCCGGGGC 
AACCCGCACT TCTGGCTCGA CGTGCGCTAC GCGATGCGCT ACGTGGAGCG GATAAGGGAC 
GCGCTCATCC GGGTGGACCC CGGGGGGGAG GAGGTCTACC GGGAGAACGC GCGGCGTTAC 
CTGCGGGAGC TCGAGCGGCT CGACCGGTAC ATCCGGGAGC GGGCCGGCTC CATCCCCGAG 
GAGCGCCGCA AGCTGGTGAC CTTCCACGAC GCCTTCCCTT ACTTCGCCCG GGCCTACGGG 
TTCGAGGAGG TCGCGGTCGT CCTCCCAAAC CCCAACGCCG AGCCCGGGAG CCGGCAGGTG 
GCGCGGGTCG TGCGGGTCGT GCGGGAGGAG GGGGTGCCGG CCATCTTCAC CGAGCCGCAG 
TTCAACTTTC GGCTCGCGCG CACCGTGGCC GAGGAGGCCG GGGTGGAGGT CTACGAGATC 
TACTCGGACA CCCTCCCGGC CGGGGACGGG CCGCGCACCT ACGAGGCCAT GATGCGGGCC 
AACATCGACC GGATAGCGGA GGCGCTGGGG TAG
 
Protein sequence
MPLRRALLAP LLLLLLAAGC AGSSGEGGGG RPEVAATTPV IGDLVRQVAG GRAEVFVLVP 
PGAEPHTFQP APRDAARLSR AEAVFKNGLG LDDWVDDLIE SAGGEGQTVV ELSRGLEPVG 
AEHGHHDEEE HGHHGGHARG NPHFWLDVRY AMRYVERIRD ALIRVDPGGE EVYRENARRY 
LRELERLDRY IRERAGSIPE ERRKLVTFHD AFPYFARAYG FEEVAVVLPN PNAEPGSRQV 
ARVVRVVREE GVPAIFTEPQ FNFRLARTVA EEAGVEVYEI YSDTLPAGDG PRTYEAMMRA 
NIDRIAEALG