Gene Rxyl_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1123 
Symbol 
ID4116866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1154170 
End bp1154814 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID638035913 
Productbeta-lactamase-like protein 
Protein accessionYP_643901 
Protein GI108803964 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0569426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGC AGAAGCTCAC CGTCGGGACC TTTCAGGAGA ACTGCTACAT CCTCGGCGAC 
GAGGCCAGCG GCTCCGGGGC GCTGGTCGAC CCCGGCGACG AGGCCGTCAG GATCGCCCTC 
GCCGTCGAGC AGACGGGGCT GGAGATAGAG AAGATCCTGC TCACCCACGC CCACATAGAC 
CACGTGGGGG CGGTCGCCTC CCTGGTCGAG GAGTACGGCT GCCCGGTCCT CGCCCACCGC 
GAGTCGGAGC CGCTGCTCGA GCAGCTCCCC ACCCAGGCCC TCATGATGGG CCTCCGCTTC 
GGCAAGGTCC CCAGGCTGGA CGGCTACATC GAGGACAGGG AGCGGGTCGA GGTGGGCGGC 
CTCACCCTCG AGGCGCTCTA CACGCCGGGC CACGCCCCCG GGCACCTGGC CTTCTACCTG 
GAGAGCGAGG GGGCGCTCCT CTCGGGGGAC GCCCTGTTCG CCGGGAGCGT CGGCCGAACC 
GACCTTCCGG GCGGCGACGC CGGGCTGCTC ATGCGCTCCA TAAAGGAGCG CATGCTGGTC 
CTGCCCGACG AGACCGTCGT GCACCCGGGG CACGGCCCCC AGACGACCAT CGGCAACGAG 
CGCGCCTACA ACCCGTTTCT GCAGCAGGGA GGTGGCATCC TGTGA
 
Protein sequence
MILQKLTVGT FQENCYILGD EASGSGALVD PGDEAVRIAL AVEQTGLEIE KILLTHAHID 
HVGAVASLVE EYGCPVLAHR ESEPLLEQLP TQALMMGLRF GKVPRLDGYI EDRERVEVGG 
LTLEALYTPG HAPGHLAFYL ESEGALLSGD ALFAGSVGRT DLPGGDAGLL MRSIKERMLV 
LPDETVVHPG HGPQTTIGNE RAYNPFLQQG GGIL