Gene Rxyl_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1100 
Symbol 
ID4116121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1134947 
End bp1136188 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content74% 
IMG OID638035890 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_643878 
Protein GI108803941 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTCCA GGGCCGCCAG GAAGTTCTCC ACCACGCCCG GCACCCGCGA CGTACTGCCG 
CCGGAGTCCA CCCGGCTGCT CGACGTCCAG CGGCGGGTGC TCGGCCGCTT CCGGCTGCAC
GGGTTCAGGG AAGTGATCAC GCCGGCCCTG GAGTACGCCG AGGTGGTGGA GGAGGCCCGC
CTGCGGGACT CGGCCTTCAA GCTCTTCGAC CCGGACAACC AGATGCTGCT TTTGCGCCCG
GAGATGACCA CCCCCATCGC CCGGCTGGTC TCCCAGCGCC TGCGGAACGC CCCCCCGCCG
TTCAAGCTCT CCTACAGCCT GCCCGTCTAC CGCCGGTCGG AGGTGGGCCG GGGCCAGAGC
GCGGAGTTCC ACCAGGCGGG GGTGGAGGTC GTCGGGTCGG CCAGCCCGGG GGAGGACGCC
GGGACGATAG CCCTCCTGGT GGAGGCGCTC GAGGCGGCGG GGCTCGGGCC GGGGGAGGAC
TTCATGGTCG TCCTGGGTCA GGCTGCCTTC TACCGGGGCT TTCTGGAGAG GAGCTGCCCG
GAGGTCGCGC CGGCGCTGCT CTCGGCGCTC GCGGGCAAGG ATCTCGTCCG GGTCGAGGAG
CTCTCGCGCC GGCTGCCCGA CGCGGTCGCC GCCGGGGCGC GCGGCATACC GCGCCTCGTC
GGCCCGGCCT CCGACGGGGC GGTGCTGGAG GAGGCGGAGC GCTACGCCTC CGGCGGCGGG
GGCGCGGCGC TGGAGAACCT GCGCGCGATC CTGGAGCTTT TGGGGGCGCA CGGGCGGCTG
GAGGCCGTGA TGCTGGACCT CGGGCTCATC GGCCGCCACG ACTACTACAC GGGGGCGGTC
TACGAGGTCT ACGCCGCAGG CCTGGGCTTC ACGGTGGCCA ACGGCGGCCG CTACGACAAC
CTGCTGCGCC GCTTCGGGGA GCCGCTCCCG GCGACGGGGT TCGCCATCTC GCTGGAGCGG
CTGGTCTCGG TGCTGCCGCC GGAGAGGCCC GCCCCGCTGC TGGTGCTCGT CGGGGAGGAC
GCGGAGGCGG TGCGCGCCGC CCGCGCGCTG CGGGGGGAGG GTGTCCCGGT GCTGCACGTC
TCCGGAGGGC TCGCCCCGGA GGAGGCCGAG CGCTACGCCC GCTCGGTGGA CGCCCGCTGG
GTTGGCTACC CGGCCCCGGG CGGGGTGAAG CTGCGGGAGG TGGGGGAGGG CGGCTTTTGG
CTTCTCGCGG TGGAGGAGGC CGCGCGGAGG GTTCTGGGTT GA
 
Protein sequence
MRSRAARKFS TTPGTRDVLP PESTRLLDVQ RRVLGRFRLH GFREVITPAL EYAEVVEEAR 
LRDSAFKLFD PDNQMLLLRP EMTTPIARLV SQRLRNAPPP FKLSYSLPVY RRSEVGRGQS
AEFHQAGVEV VGSASPGEDA GTIALLVEAL EAAGLGPGED FMVVLGQAAF YRGFLERSCP
EVAPALLSAL AGKDLVRVEE LSRRLPDAVA AGARGIPRLV GPASDGAVLE EAERYASGGG
GAALENLRAI LELLGAHGRL EAVMLDLGLI GRHDYYTGAV YEVYAAGLGF TVANGGRYDN
LLRRFGEPLP ATGFAISLER LVSVLPPERP APLLVLVGED AEAVRAARAL RGEGVPVLHV
SGGLAPEEAE RYARSVDARW VGYPAPGGVK LREVGEGGFW LLAVEEAARR VLG