Gene Rxyl_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1062 
Symbol 
ID4116942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1096946 
End bp1097557 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content74% 
IMG OID638035852 
Productglycerol uptake operon antiterminator 
Protein accessionYP_643840 
Protein GI108803903 
COG category[K] Transcription 
COG ID[COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.168143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTGG GACGGGGTTC CAGAAGAGCG GAGCGCTTCG TCGCGGCGCT GCGCAGAAGG 
CCGGTGATCC CCGCCGTCCG GGGGCCGGAG GGTGCGCTCG AGCGCGCCCT CTCGGGGGAT 
CACGCGGCGA TCTTCATCCT CGGCGGGGAT CTCTTCCGGG CGCTGGGGCT CGTCTCCGGC 
CGCGGGCGGC GTCCCGTGGT GTGCGTCAAC GTGGACACCG TCGGCGGCAT CGCCGCCGAC 
CAGAGCGGCG TGCGGTTCCT CGCGGGGAGG GTGGAGGGGA TCATCTCCAC CCACCGGCAC 
ATCATCGAGC TCGGCCGGAG CGCCGGCCTC ATAACCATCC AGCGCCTCTT CGCCATAGAC 
TCCGGCGCCG TGGACCGCGG GCTCAAGCTC ATCCGCCGCG CCGCCCCGGA CTGCGTGGAG 
ATCCTTCCCG GCCTCGCCTA CCCGGAGATA GCGGACGAGT ACCGCCGGGC GCTCTCCCAG 
CCGGCGCTGG CCGGCGGCCT GGTCCGGGAT GCGAGAACAC TCCGGGCCAT CCTCGCCGCG 
GGGGCCACCG CCGTCTCCAC CAGCGACCCC TCCCTCTGGG GGGAGCTTGA CTCGGCGCCC 
GGCACCCGGT AA
 
Protein sequence
MGVGRGSRRA ERFVAALRRR PVIPAVRGPE GALERALSGD HAAIFILGGD LFRALGLVSG 
RGRRPVVCVN VDTVGGIAAD QSGVRFLAGR VEGIISTHRH IIELGRSAGL ITIQRLFAID 
SGAVDRGLKL IRRAAPDCVE ILPGLAYPEI ADEYRRALSQ PALAGGLVRD ARTLRAILAA 
GATAVSTSDP SLWGELDSAP GTR