Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1022 |
Symbol | |
ID | 4116708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1057790 |
End bp | 1059055 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638035812 |
Product | citrate transporter |
Protein accession | YP_643800 |
Protein GI | 108803863 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.681723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGTCT TTGCTGTCGT GCTCGCCCTC ATCGGGGCCG AGCGCGTCGA CCGCACCGTG GCCGCGCTGC TGGGGGCGGC CGTCATCGTC TCGCTCGGGG TGGTGGAGCA GGAGCGCGCC GCGAGCGAGT TCATAGACTG GAACACCATC GGCCTGCTCG CGGGGATGAT GGTCATCGTG GCGATCCTGG ACAGGACCGG GATCTTCGAG TACCTGGCGA TAAAGAGCGC CCAGTGGGGC CGGGCGCGGC CGGGGAGGAT CCTCGTCATC CTCGCGCTGG TCACGGCTTT CCTCTCGGCC TTCCTGGACA ACGTGACCAC CGTGATCCTC ATGGTCCCGG TGACCTTCCT GATCGCCGAC GCGCTGGGGA TGTCGCCGGT GCCCTTTCTG CTGACCCAGG TCTTCGCCTC CAACATCGGG GGGGCCTCCA CGCTCATCGG GGACCCGCCG AACATCCTTA TCGGGAGCGC CGCGGGCCTC TCTTTCATGG ATTTCGTGGT GAACATGGCC CCGGTGGTGG TCCTCTCGCT CGTCCCGGCG CTGGCGTTTC TGTACTTCGT GTTCCGCGGG GAGTTCCGCA GCGACAAGCG GGCCCGGGAG ACCATAGAGC AGATGGACGC GCGGGGGGCC ATCCGGGACC CGGTGCTCCT GCGCCGGTCG CTCATCGTGC TCTCGCTGGT GATAGCGGCG TTCTTCCTGC ACGGGCTGCT GCATCTCGAG GCCGCCACCA TCGCCCTCTT CGGGGCCGCG GGCCTGATGC TCTACGCCCG CGCGAACGTG GAGGAGGTGC TGCGGGAGGT GGAGTGGCCC ACCCTGCTCT TCTTCGTGGG GCTCTTCGTG CTGGTCGGCG GGCTCGAGGT GACCGGCTTC GTGGGGAGGG TGGCGGAGCT TCTGACCGGC GTCTCCGACG GGGCCTCGGT GGCCACGGCG CTGGTGGTGA TGTGGGGCAG CGGCTTCGCC TCGGCGGTCA TAGACAACAT CCCGTTCACC GCCACCATGA TCCCGGTGAT CCAGGAGCTG GCGCGGGCGG AGGGCCTCTC GCGCGAGCAG CTGGAGCCGC TGTGGTGGTC GCTGGCCATC GGCGCGGACT TCGGGGGGAA CGCCACGCTC ATCGGGGCCT CGGCGAACGT GGTGGTCGCC GGGATGAGCG AGCGGGCGGG CCAGAGGATC TCGTTCCTGA GGTTCATGGC CTACGGCGTC CCGGTGACCC TGATCTCCCT CGCGGTGGCT ACCCCCTACG TGGCGCTCCG CTACTACCTG CTCTAG
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Protein sequence | MSVFAVVLAL IGAERVDRTV AALLGAAVIV SLGVVEQERA ASEFIDWNTI GLLAGMMVIV AILDRTGIFE YLAIKSAQWG RARPGRILVI LALVTAFLSA FLDNVTTVIL MVPVTFLIAD ALGMSPVPFL LTQVFASNIG GASTLIGDPP NILIGSAAGL SFMDFVVNMA PVVVLSLVPA LAFLYFVFRG EFRSDKRARE TIEQMDARGA IRDPVLLRRS LIVLSLVIAA FFLHGLLHLE AATIALFGAA GLMLYARANV EEVLREVEWP TLLFFVGLFV LVGGLEVTGF VGRVAELLTG VSDGASVATA LVVMWGSGFA SAVIDNIPFT ATMIPVIQEL ARAEGLSREQ LEPLWWSLAI GADFGGNATL IGASANVVVA GMSERAGQRI SFLRFMAYGV PVTLISLAVA TPYVALRYYL L
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