Gene Rxyl_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1022 
Symbol 
ID4116708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1057790 
End bp1059055 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content69% 
IMG OID638035812 
Productcitrate transporter 
Protein accessionYP_643800 
Protein GI108803863 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.681723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGTCT TTGCTGTCGT GCTCGCCCTC ATCGGGGCCG AGCGCGTCGA CCGCACCGTG 
GCCGCGCTGC TGGGGGCGGC CGTCATCGTC TCGCTCGGGG TGGTGGAGCA GGAGCGCGCC
GCGAGCGAGT TCATAGACTG GAACACCATC GGCCTGCTCG CGGGGATGAT GGTCATCGTG
GCGATCCTGG ACAGGACCGG GATCTTCGAG TACCTGGCGA TAAAGAGCGC CCAGTGGGGC
CGGGCGCGGC CGGGGAGGAT CCTCGTCATC CTCGCGCTGG TCACGGCTTT CCTCTCGGCC
TTCCTGGACA ACGTGACCAC CGTGATCCTC ATGGTCCCGG TGACCTTCCT GATCGCCGAC
GCGCTGGGGA TGTCGCCGGT GCCCTTTCTG CTGACCCAGG TCTTCGCCTC CAACATCGGG
GGGGCCTCCA CGCTCATCGG GGACCCGCCG AACATCCTTA TCGGGAGCGC CGCGGGCCTC
TCTTTCATGG ATTTCGTGGT GAACATGGCC CCGGTGGTGG TCCTCTCGCT CGTCCCGGCG
CTGGCGTTTC TGTACTTCGT GTTCCGCGGG GAGTTCCGCA GCGACAAGCG GGCCCGGGAG
ACCATAGAGC AGATGGACGC GCGGGGGGCC ATCCGGGACC CGGTGCTCCT GCGCCGGTCG
CTCATCGTGC TCTCGCTGGT GATAGCGGCG TTCTTCCTGC ACGGGCTGCT GCATCTCGAG
GCCGCCACCA TCGCCCTCTT CGGGGCCGCG GGCCTGATGC TCTACGCCCG CGCGAACGTG
GAGGAGGTGC TGCGGGAGGT GGAGTGGCCC ACCCTGCTCT TCTTCGTGGG GCTCTTCGTG
CTGGTCGGCG GGCTCGAGGT GACCGGCTTC GTGGGGAGGG TGGCGGAGCT TCTGACCGGC
GTCTCCGACG GGGCCTCGGT GGCCACGGCG CTGGTGGTGA TGTGGGGCAG CGGCTTCGCC
TCGGCGGTCA TAGACAACAT CCCGTTCACC GCCACCATGA TCCCGGTGAT CCAGGAGCTG
GCGCGGGCGG AGGGCCTCTC GCGCGAGCAG CTGGAGCCGC TGTGGTGGTC GCTGGCCATC
GGCGCGGACT TCGGGGGGAA CGCCACGCTC ATCGGGGCCT CGGCGAACGT GGTGGTCGCC
GGGATGAGCG AGCGGGCGGG CCAGAGGATC TCGTTCCTGA GGTTCATGGC CTACGGCGTC
CCGGTGACCC TGATCTCCCT CGCGGTGGCT ACCCCCTACG TGGCGCTCCG CTACTACCTG
CTCTAG
 
Protein sequence
MSVFAVVLAL IGAERVDRTV AALLGAAVIV SLGVVEQERA ASEFIDWNTI GLLAGMMVIV 
AILDRTGIFE YLAIKSAQWG RARPGRILVI LALVTAFLSA FLDNVTTVIL MVPVTFLIAD
ALGMSPVPFL LTQVFASNIG GASTLIGDPP NILIGSAAGL SFMDFVVNMA PVVVLSLVPA
LAFLYFVFRG EFRSDKRARE TIEQMDARGA IRDPVLLRRS LIVLSLVIAA FFLHGLLHLE
AATIALFGAA GLMLYARANV EEVLREVEWP TLLFFVGLFV LVGGLEVTGF VGRVAELLTG
VSDGASVATA LVVMWGSGFA SAVIDNIPFT ATMIPVIQEL ARAEGLSREQ LEPLWWSLAI
GADFGGNATL IGASANVVVA GMSERAGQRI SFLRFMAYGV PVTLISLAVA TPYVALRYYL
L