| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0847 |
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| Symbol | |
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| ID | 4117137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 885777 |
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| End bp | 888344 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638035630 |
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| Product | hypothetical protein |
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| Protein accession | YP_643626 |
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| Protein GI | 108803689 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGCTGC GCAGCTTCCA CGGCCTCAGC CTGAGGAGCC TCGCCGCCAG GCCGCAGCGC
ACCCTGCTCA CGGCCACCGG GATCGTGCTG GGCGTCGGGA TCGTCTTCGG GGTCATAACC
CTCTCGGACA CCATGTCCTC CACCTTCAGA GACCTCTACT CGCGGGCTTT CGGCGCCGCG
GAGGTGGTGG TGACCGCCTC GGGCGGCAAC GGCACCTTCA GCGAGGGGGT GGTGCGCGAG
ATCCGGGAGG TCCCCGGGGC GGTCCGGGCG GCGCCCCGCC TCTCCGTACC CTCCTCCCTG
ATCCTCGACC GGCGGCGGGA GGACGGGCTC CCGGAGGTGC GCGGGATGCG CCTCTTCGGG
GTCGAGCCCT CCTCGGCCGC GCTCGCCACG GGCTTCGCGC TGGAGGGCGG GAGGTACCCC
CGCCGGGGGG CGGAGGTGAC GCTCGACGCC GCCTCCGCCG AGAGCGTGGG GGTGGGGATA
GGCGAGGAGG TCACGCTCGG CACGCCGGAC GGGCCGCGGC GCGCCGAGGT GGTCGGCCTG
CTCAGGATCC CGGGCGGCTC CTTCGGGGGC CTCTCCTTCG CGATGGCGCC CCTCGCCTGG
ACCCAGCAGG CCTTCGGCGA GAAAGAGAGG ATCTCCGGGG TCGCCGTGGA CGCCGCCGAG
GGCACCTCCC CGGCCCTGCT GCGGGAGCGG CTCGACCGCA GGCTCGGCCC CGGGCTCGCC
GTGGAGCGCT CCGAGACCCG CACCGAGCAG GTCACCAGCC AGCTGCAGGG GTTCAGGATC
TCGCTGCTCT TCTTTGCGGG CACCGCGCTC TTCGTCGGGG CCTTTCTGGT CTTCAACGCC
CTCTCGATGA CCGTGCTCGA GAGGACCCGC GAGCTCGGCA TGCTCCGGGC CCTCGGCTCG
ACCCGCGCCA TGCTCGCCCG CTCGGTGCTG CTTGAGGCCC TGCTCCTGGG GGCCGCCGGC
TCCCTCGCCG GGCTGCTCCT CGGGTACGGC ATGGCCTGGG GGCTGGTCTA CCTCTTCGGG
CGGGCGTTCA TGTTCGAGAT CACCACACTC TCCGTCTCCC CCTTCGCCCT CCTCTCCGCG
CTCGCCGTCG GCGTCGCCGT CACCGCCCTG GCCGCCCTCT ACCCCGCGCT GCGCGCCGGG
AGGGTGAGCC CGGTGGAGGC CATGCGCTCC CGCCGGGAGG CGGCGCGCGA CGGGCGGGGC
CGCCCCCGCC TCGCCCGGCT CGTCCCCGCC GCGGGGCTCG CCCTCGCCCT GGCGGGGGGC
GCCTGGACCT ACCACCTCGC CAGGAACCTC TCCGCCAGCC TCGACGGCGC GGTCTTCGCC
TCCGGCATAG CCGCCGTCCT GGGGGCCTTT CTCGGGGTCT CGATGGTCGT GCCCGCCCTC
GTCCGCCCGC TGGCCGGGCT CCTCTCCCCC GGGCTGCGCC TGCTCTTCGG GGTGGAGGGC
CGGATGGCGG CGGCGAACGC CGCCCGCAAC CGGGTCCGCA CCGCCCTGAC CGCCTCGGCC
CTCATGGTCG GGGTCTCCCT CGTGATAGCC TTCGCCGCCC TGGGCGGGAG CGTCCTCGGC
TCCATCCGGG CCTACCTGGA GGGCTCCCTG GGCAGCGACT ACGTCGTACA GCCCGCGACC
CAGAGCTCGG ACGCGGCCTT CTCCGACCGC CTGCCGCAGC GGGTGCGAAA GGTGGTGGGG
GTGGAGAAGA CCACCGCCAT AGCCTCCGCC TTCCTGCGCA GCGGGGACGC CACCTACATC
GTGTTCGGCC TGGACGCAAG CTACCCGGAC ATCTTCCGCA TAGACTACGC CTCCGGCGGC
CCGGGGGCCT TCGGGCGCGT GCAGGGCGAG GGCGCGGCCC TCGTGGGCCG GCAGCTGGCC
TCCTCGCGCG GCCTGCGGGT CGGGGAAAAG ATAAGGCTCC CCACCCCCCG CGGACCCAGA
GAGTACGAGG TCGCGGGCGT CGTCGCAAAC GACGTGCTCG GCGGCGGCTC CGGCGTCTAC
CTCTCCAGGG AGACCCTGGC GCGCGACCTG GGCGAGCGGG AGGGGGAGTT CCTCGCCGTG
AAGACCTCGC CCGGCGCCGA CCGGGGGGAG GTGGAGCGAA GGATCCGGGA GATCCTGCGG
AACTACCCCC AGTTCACCCT CTACTCCAAC GCCGAGTGGA AGGCGCAGAT AGAGCGGGAC
TTCAACCGCC AGTACGTCTT CTTCTACGCC ATCATGGGGG TCTCGGTCGC CGTCTCCGCC
TTCGGGGTGG TCAACACCCT CTCCATGAGC GTCTTCGAGC GGACGCGCGA GATAGGCATC
CTGCGCGCCA TCGGGGCCAC CCGGCTGCAG GTCGGGCGGC TGGTGGTGGA GGAGGGCGTG
ATCATCAGCC TCATCGGCTG CCTCGTCGGG GTGGCGGTGG GCTCGCTGCT GGGCTACCTC
TTCGTCCGGG GCACCGGCGC CGGGGGGTTC GAGGTCTCCT TCTACTACCC CAGGCTCCCG
GCCGCCGCCG CCCTCCTCTC CGGGCTCGCC ATCGGCGCCC TCGCCGGGCT GCTCCCCGCC
CGCACCGCGG CCCGCAAGGA CCCGGTGGAG GCCCTCCAGT ACGAGTGA
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| Protein sequence | MRLRSFHGLS LRSLAARPQR TLLTATGIVL GVGIVFGVIT LSDTMSSTFR DLYSRAFGAA
EVVVTASGGN GTFSEGVVRE IREVPGAVRA APRLSVPSSL ILDRRREDGL PEVRGMRLFG
VEPSSAALAT GFALEGGRYP RRGAEVTLDA ASAESVGVGI GEEVTLGTPD GPRRAEVVGL
LRIPGGSFGG LSFAMAPLAW TQQAFGEKER ISGVAVDAAE GTSPALLRER LDRRLGPGLA
VERSETRTEQ VTSQLQGFRI SLLFFAGTAL FVGAFLVFNA LSMTVLERTR ELGMLRALGS
TRAMLARSVL LEALLLGAAG SLAGLLLGYG MAWGLVYLFG RAFMFEITTL SVSPFALLSA
LAVGVAVTAL AALYPALRAG RVSPVEAMRS RREAARDGRG RPRLARLVPA AGLALALAGG
AWTYHLARNL SASLDGAVFA SGIAAVLGAF LGVSMVVPAL VRPLAGLLSP GLRLLFGVEG
RMAAANAARN RVRTALTASA LMVGVSLVIA FAALGGSVLG SIRAYLEGSL GSDYVVQPAT
QSSDAAFSDR LPQRVRKVVG VEKTTAIASA FLRSGDATYI VFGLDASYPD IFRIDYASGG
PGAFGRVQGE GAALVGRQLA SSRGLRVGEK IRLPTPRGPR EYEVAGVVAN DVLGGGSGVY
LSRETLARDL GEREGEFLAV KTSPGADRGE VERRIREILR NYPQFTLYSN AEWKAQIERD
FNRQYVFFYA IMGVSVAVSA FGVVNTLSMS VFERTREIGI LRAIGATRLQ VGRLVVEEGV
IISLIGCLVG VAVGSLLGYL FVRGTGAGGF EVSFYYPRLP AAAALLSGLA IGALAGLLPA
RTAARKDPVE ALQYE
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