| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0837 |
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| Symbol | |
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| ID | 4117128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 874790 |
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| End bp | 876373 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638035621 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_643617 |
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| Protein GI | 108803680 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.746889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGGTGC TCGTAACCGA GAAGCTCGCC GAGCGCGGCG TAGAGCTCCT GCGGAGGGAG
TTCGAGGTCG ACGTGCTCCT CGGCCTCTCG CCCGGCGAGC TGCTGGAGAG GATCGGGGAG
TACGACGGGC TGATCGTCCG GAGCGCCACC AAGGTGACTG CGGAGGTCAT AGAGGCCGCC
GGGAGGCTCA AGGCCATCGG GCGCGCGGGG ATCGGGGTGG ACAACATAGA CATCGAGGCG
GCCACCAAGC GGGGCATCCT GGTGGCCAAC GCCCCGGAGA GCAACACGGT GGCCGCCGCC
GAGCACACCC TGGGGCTGAT GCTCGCCGTC GCCCGGCGCA TCCCGGCCGC CGACGCCTCC
CTGCGGCGCG GGGAGTGGAA CCGCGCCGCC TTCAAGGGCG TGGAGGTCGC CGAGAAGACG
CTCGGCCTGG TCGGCCTGGG GCACGTGGGC TCCATCGTCG CCCGCGGCGC CCTGGGGATG
GGGATGCGCG TCCTCGCCTA CGACCCCTAC GTCTCCGAGG AGAGGATGCG CTCGATGAAC
GTGGAGCGGG CGGGCTCGCT GGAGGAGATC TTCGAGGAGG CCGACTTCGT CTCGCTGCAC
GTCCCCCGCA CTCCCCAGAC CACGGGCATG GTGGGCGAGG AGGAGCTGGC GCGGATGAAG
CCCACCGCCT ACCTGATAAA CGTGGCCCGC GGCGGGATAG TGGACGAGAC CGCCCTCTAC
AACGCCCTCA AGCAGGGCGA GATAGCGGGG GCCGCGCTCG ACGTCTTCGC GGAGGAGCCG
ACCACCGACT CCCCCCTCTT CGCCCTCCCG AACGTGGTCG TCACCCCCCA CCTGGGGGCG
AGCACCGCCG AGGCCCAGGA CCGGGCGGGC GTGACGGCGG CCGAGCAGGT GGCGGCGGCC
CTCAGGGGAG AGGTGCCGAT ACACGCTATA AACGCCCCGG TGCCCGCGGG GGAGGGGGCG
GAGTTCGTCT CCCAGTTCGC CGGGCTCTGC GAGACGCTGG GGAGGCTGCT CTACCAGCTC
ACGGACCGGC CCGGCAGCCG CCTCAAGATA GAGTACCGCG GCGAGATCGG GGCCTACGAC
ACCCGGCTGC TGGACGTCTC GGTGCAGAAG GGGCTCCTGT CCCGGATGGT GCACGAGCCC
CTGAACTACG TTAACACCCC CATCCTGGCG AAGGAGCGGG GGCTGAAGGT CGAGACCTCG
AAGACCTCGG AGAGCTCGGA CTACACCAAC CTGGTGGTGG TCCGCATCGA GAGCAACGGC
GGCGAGAGCG TGGTGAGCGG CACCCTCACC GGCCCCCGGA TGCAGCCCCG GCTGGTCGAG
GCCCTCGGCT ACACGCTGGA TATCGTCCCG GAGCGGCACA TGCTGTTTAT CCGCAACGAG
GACGTGCCGG GCATGATCGG GAAGGTCGGC ACGATCCTCG GCGAGCACGG GATAAACATC
GGCAACATGG CCGTGGGGCG CGGCGAGCCG GGAAGCCGGG CGGCGATGGC GGTGACCGTG
GACGAGCCGG TGCCCCCGGA GGTCGTCGAG AGCCTCCTGA ATATCCCGGG CTTCAACGAC
GCCCGGGCCG TCACCCTCTA CTAA
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| Protein sequence | MRVLVTEKLA ERGVELLRRE FEVDVLLGLS PGELLERIGE YDGLIVRSAT KVTAEVIEAA
GRLKAIGRAG IGVDNIDIEA ATKRGILVAN APESNTVAAA EHTLGLMLAV ARRIPAADAS
LRRGEWNRAA FKGVEVAEKT LGLVGLGHVG SIVARGALGM GMRVLAYDPY VSEERMRSMN
VERAGSLEEI FEEADFVSLH VPRTPQTTGM VGEEELARMK PTAYLINVAR GGIVDETALY
NALKQGEIAG AALDVFAEEP TTDSPLFALP NVVVTPHLGA STAEAQDRAG VTAAEQVAAA
LRGEVPIHAI NAPVPAGEGA EFVSQFAGLC ETLGRLLYQL TDRPGSRLKI EYRGEIGAYD
TRLLDVSVQK GLLSRMVHEP LNYVNTPILA KERGLKVETS KTSESSDYTN LVVVRIESNG
GESVVSGTLT GPRMQPRLVE ALGYTLDIVP ERHMLFIRNE DVPGMIGKVG TILGEHGINI
GNMAVGRGEP GSRAAMAVTV DEPVPPEVVE SLLNIPGFND ARAVTLY
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