Gene Rxyl_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0810 
Symbol 
ID4116186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp843462 
End bp844133 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content76% 
IMG OID638035594 
Productpeptidase M22, glycoprotease 
Protein accessionYP_643590 
Protein GI108803653 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGATTC TGGCCCTCGA CGCCTCGACC TCCGTGGTGA GCGTCGCCCT GGCCCGCGCG 
GCGGGCGGCG GGCGGCGAAT GCTCGCGGAG ATCTCGCTCG AGGACCGCGG GGCCTCGGAG
GGGCTGCTGC CCGCGGTCCA CGCGGCGCTC GGCCTCTGCG GGGAGGAGCT GGGCTCGGTG
GAGCGGATCG TCGTCGGGGT GGGCCCCGGG ACCTTCACCG GCATCCGGAT CGCGGCGGCC
ACCGCCCGCT CGCTCGCGCT GGGGAGCGGC ATCCCCCTGT GCGCCAACAC GACGCTGGCC
GCCCTGGCCG CCCCGGCGCT CTCGGTGAGC GGGGAGGTGC TGGCGGTCCT GGACGCCAAG
CGGGGCGAGG TCTTCGCCCA GCCCTTCGCC TCCGGAGGGC CCTCCGGGGA GATCGTCTGC
AGCAGGCCCG GGGAGCTGCG GGCCGCGGGC TCCCCTCTGG TCGTCGGCGA CGGTGCGGTG
CGCTACCGGG AGGCGCTCTC CGGGCTGGGC CGGATACCGC CCGACGGCTC CCCTTTGCAC
AGGGTCTCCG CCGCAGGGCA CGTGCTCTCC TCCAGCCTCG AGCCCTCCCC GCCCGAGGAG
GTCGTCCCCG TCTACGTCCG CGAGCCGGAC GCCGAGGTCC GGCGGGATCT CAACCCCTGG
AGCCGCCCGT GA
 
Protein sequence
MLILALDAST SVVSVALARA AGGGRRMLAE ISLEDRGASE GLLPAVHAAL GLCGEELGSV 
ERIVVGVGPG TFTGIRIAAA TARSLALGSG IPLCANTTLA ALAAPALSVS GEVLAVLDAK
RGEVFAQPFA SGGPSGEIVC SRPGELRAAG SPLVVGDGAV RYREALSGLG RIPPDGSPLH
RVSAAGHVLS SSLEPSPPEE VVPVYVREPD AEVRRDLNPW SRP