Gene Rxyl_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0804 
Symbol 
ID4116180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp839958 
End bp841055 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content77% 
IMG OID638035588 
Productalanine racemase 
Protein accessionYP_643584 
Protein GI108803647 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGGTGC CGGGACGCGT CTGGGCCGAG GTGGACCTCG GCGCCGTCCG CCACAACGTG 
CGGACCCTCC GCCGCCGCTC CCGGGCCCCG CGCCTGATGG CCGTGGTGAA GGCCGACGCC
TACGGCCACG GGGCGGTGCC GGTCGCCCGG GCGGCGCTCG CGGGCGGGGC CGACAGCCTC
GCCGTGGCCA CCGCCGGGGA GGGCGCCGAG CTGCGCCGGG CCGGGATCCG GGCGCCCGTC
CTCGTCTTCG GGGACCTCAC CCCGGAGGGG CTGCGGGCCG CCGCTCGCGA GCGGCTGGCG
GTGAGCGCCC ACTCCGTGCC CTCCGCCCGC CGCATCGCCG CCTCCGGCCT CGACCTGGAA
GTGCACCTTA AGGTGGATAC CGGCATGAAC CGGTGGGGGC TCGAGCCCGG CGAGGTCGGG
GCGGCGCTCA AGGCCCTGGG GAGAACCCCC GACGGGGTCT ACACCCACCT GGCCTGCGCC
GACTCCGACC CGGAGGCCAC CGGGCGGCAG CTCGCCCTCT TCGACTCCGT GCTCGCCGCG
CACCCCTTCG GCGGGGCGCT CGCGCACGCC GCCAACTCGG CCGGCACCCT CTGGCACCCG
GGCTCGCACT ACGGCTGCGT GCGCCCCGGC ATAGCCCTCT ACGGGCTCCA CCCCGCCGGG
GACGCCGGAG ACCCGGCGGC GGAGGGCCTC CGGCCCGCGC TCGCGCTCAA GAGCTACGTC
GCCGCGGTCC GGCGCCTCGA GCCCGGAGAG GGCGTCTCCT ACGGGCTGAC CTTCCGCGCC
CCGGAGCCGA TGCTCGCCGC CACCGTGCCC GTGGGGTACG CCGACGGCTA CCGGCGGGCG
CTCTCCGGCA GGGCCGAGGC GCTCATCCGC GGCCGCCGGC GGCCGCTGCT CGGGCGGGTC
TCGATGGACG CCTGCGTCTT CGCGGCGGAT AGGGAGGTGC GGGTGGGGGA CGAGGTCGTG
CTCCTCGGCG AGCAGGGAGG TGGGGCGGTC CGGGCCGAGG AGCTCGCCGC CCGCGCCGGC
ACGATAAACT ACGAGATAAC AACCGGCCTG AACCCCCGGC GTGTGGAGAG GAGCTACGCA
GATGTTCAAG GATCTTGA
 
Protein sequence
MEVPGRVWAE VDLGAVRHNV RTLRRRSRAP RLMAVVKADA YGHGAVPVAR AALAGGADSL 
AVATAGEGAE LRRAGIRAPV LVFGDLTPEG LRAAARERLA VSAHSVPSAR RIAASGLDLE
VHLKVDTGMN RWGLEPGEVG AALKALGRTP DGVYTHLACA DSDPEATGRQ LALFDSVLAA
HPFGGALAHA ANSAGTLWHP GSHYGCVRPG IALYGLHPAG DAGDPAAEGL RPALALKSYV
AAVRRLEPGE GVSYGLTFRA PEPMLAATVP VGYADGYRRA LSGRAEALIR GRRRPLLGRV
SMDACVFAAD REVRVGDEVV LLGEQGGGAV RAEELAARAG TINYEITTGL NPRRVERSYA
DVQGS