Gene Rxyl_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0796 
Symbol 
ID4116172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp832297 
End bp833319 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content74% 
IMG OID638035580 
ProductL-threonine aldolase 
Protein accessionYP_643576 
Protein GI108803639 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.199246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC TTCGCAGCGA CACGGTGACC CGGCCCTCGG AGGAGATGCG CCGGGCGATG 
TACGAGGCGC CGGTCGGCGA CGACGTGTTC GGGGAGGACC CCACCGTGAA CCGGCTGGAG
GAGTACGTGG CGGAGCTGCT CGGCAAGGAG GCCGCCCTCT ACGCGCCCTC CGGCACGATG
ACCAACCAGA TCGGGATCCA CGTAAGCACC TCGCGGGGAG ACGAGATCCT GGTCCACGAG
GGGGCGCACG TCTACAACTA CGAGGCCGGG GCGCCCGCCC TGCTCTCGGG GGTCCAGGTC
CGGCCGCTCC CCGGCAGGGA CGGCGTGATC TCTCCGGAGA CCGTGCGGGA CGCGATCCGG
CCCGAGGACG ACCACTTCCC CCGCCAGCGG CTGCTCTGCC TGGAGAACAC CCACAACGCG
GCGGGCGGGA AGGTCTACCC GCTGGAGGAG TTCGCCGCCG CCGCTGCCGA GGCCCGGCGC
CACGGCCTCA GGGTGCACCT CGACGGCGCC CGTCTCTTCA ACGCGCAGGT GGCCACCGGC
ATCCCCGCCC GCGAGTGGGC CGCGCACGCC GACACGGTCT CCGTCTGCTC CTCCAAGGGC
CTCGGGGCGC CGGTCGGCTC CCTGCTCGCC GGGGACGCGG AGACCATCCG CCGGGCCCGG
CGGGCGCGCA AGGCGTTCGG CGGCGGGATG CGCCAGGCCG GCGTGATAGC GGCCGCGGCC
CTCTACGCCT TCCGGAACAA CGTCGAGCGG CTGGCGGAGG ACCACGAGCG CGCCCGGCGC
CTGGCGGAGG GACTCGCCGC CGCCGGCTAC GAGGTGGAGC CCCCGGAGAC CAACATGGTG
CTGGTGCGGG TGGAGGACGT GCCCGGCTTT CTGCGCAAGC TCGCGGAGAG GGGCGTCCTC
GCCACCCCGG GGCGCCCGGG GTACGTCCGG TTCTGCACCC ACCTCGACGT CGGGGACGAG
GAGATCGAAC GGGCTGTGGA GCGCGCCGCC GGCCTCGTCT CCGCGGCCGC CGGCCGCCGT
TGA
 
Protein sequence
MIDLRSDTVT RPSEEMRRAM YEAPVGDDVF GEDPTVNRLE EYVAELLGKE AALYAPSGTM 
TNQIGIHVST SRGDEILVHE GAHVYNYEAG APALLSGVQV RPLPGRDGVI SPETVRDAIR
PEDDHFPRQR LLCLENTHNA AGGKVYPLEE FAAAAAEARR HGLRVHLDGA RLFNAQVATG
IPAREWAAHA DTVSVCSSKG LGAPVGSLLA GDAETIRRAR RARKAFGGGM RQAGVIAAAA
LYAFRNNVER LAEDHERARR LAEGLAAAGY EVEPPETNMV LVRVEDVPGF LRKLAERGVL
ATPGRPGYVR FCTHLDVGDE EIERAVERAA GLVSAAAGRR