| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0669 |
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| Symbol | |
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| ID | 4114655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 703097 |
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| End bp | 704416 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638035454 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_643451 |
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| Protein GI | 108803514 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0601778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGGA AGACGCGTGC GGGGCTGAGC CGGAAGGAGT TCCTGAGGCT CGGGGGTGCC
TCCCTGGCGG GGGCCGCCCT TCTCGGTGCT GCGGGTTGCG GGGAGGAGGC CGGTACCGGG
GAGGGGCCGG TGAGGCTCGT CTTCTCCCAC GGCCCCGAGC CCTCCGGCGT CCTCAGAGAG
CAGCTGGACG CCTTCAACCG GCGGCACGAG GGCGAGATCC GGGTCGAGTG GCGGGAGATG
GCGGCGGACA CCGGACAGTA CTTCAACCAG CTCAGGACCG AGTTTCAGGC CGGGGCGAGC
GAGATAGACG TGATAAGCGG CGACGTGATC TGGCCGGCCC AGTTCGCGGC GAACGGCTGG
ATCGAGGAGC TCTCCGGCCG CTTCCCCGAG TCCGAGCGCA GCCGGTTTCT GAACGCCCCG
GTGGAGGCCA ATACGTGGGA GGGCGGGGTC TACGGGGTCC CCTGGTTCAC CGACGCGGGC
ATGCTCTACT ACCGCAAAGA CCTCCTGCAG AAGAGTGGCT TCCCCGAAGC CCCGAAGACC
TGGGGCGAGC TCAAGGAGAT GGCCCTCGAG ACAAAGCGCG AGCAGGGCGT GGAGTACGGT
TTTGTCTTCC AGGGCGCCGA GTACGAGGGC GGCGTCGTGG ACGGGCTGGA GTACATCTGG
ACACATGGCG GTGGCGTGCT CGACGAGCGT TCGGAGAAGG TTGTCGTAGA CAGCCCGGAG
GCCGCAGCGG GGCTCGCTAC CGAGCGGAGC ATGATAGAGG ATGGGGTCGC CCCGATCTCC
GTGGTCAACT ACAAGGAGCA GGAGACCCAC CAGACGTTTA TCCGGGGGGC CTCGGTCTTC
GCCCGCAACT GGCCCTACAT GTACGGCCTG ATAGCGGACC CGGAACAGTC CAACGTGGAC
CCCGCCCAGG TGGGCGTCGC GCCGCTGCCG CACGCGCCGG GCGAGCGGAG CTTCAGCGGC
CTCGGCGGCT GGAACCTGTT CATCAACGCC GCCTCGCAGA AGAAGGACGC GGCCTGGACC
CTCATAGAGT ACCTCGCCGC CCCCGAGCAG CAGAAGCAGC GGGCGTTGGA GGGAGGGTAT
CTGCCCACCC TCAGAGAGCT CTACGAGGAC CGGGAGATCC TGGACAAGGT GCCCGTGGTC
AGGCTGGGCA AGGGGGCGAT CCTGAGCGCC CGCCCGCGCC CGGTCTCCCC CTACTACTCG
GACATGTCGC TCAGGATGGC CGAGCAGTTC AACGCCGCGC TGAAGGGCAA CGTCTCGCCG
CGCAGGGCGG TGGAGATCCT GCAGCGGGAG CTCGAGAACA TCCTGGAGCG GGCCGGGTAG
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| Protein sequence | MRRKTRAGLS RKEFLRLGGA SLAGAALLGA AGCGEEAGTG EGPVRLVFSH GPEPSGVLRE
QLDAFNRRHE GEIRVEWREM AADTGQYFNQ LRTEFQAGAS EIDVISGDVI WPAQFAANGW
IEELSGRFPE SERSRFLNAP VEANTWEGGV YGVPWFTDAG MLYYRKDLLQ KSGFPEAPKT
WGELKEMALE TKREQGVEYG FVFQGAEYEG GVVDGLEYIW THGGGVLDER SEKVVVDSPE
AAAGLATERS MIEDGVAPIS VVNYKEQETH QTFIRGASVF ARNWPYMYGL IADPEQSNVD
PAQVGVAPLP HAPGERSFSG LGGWNLFINA ASQKKDAAWT LIEYLAAPEQ QKQRALEGGY
LPTLRELYED REILDKVPVV RLGKGAILSA RPRPVSPYYS DMSLRMAEQF NAALKGNVSP
RRAVEILQRE LENILERAG
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