| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0576 |
|---|
| Symbol | |
|---|
| ID | 4116755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 605484 |
|---|
| End bp | 607013 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 638035362 |
|---|
| Product | histidine ammonia-lyase |
|---|
| Protein accession | YP_643360 |
|---|
| Protein GI | 108803423 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000203792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGCGG GCGCGGTGCT CGTAGACGGG CTGGACTTCG GGGGCGTAAT CGCCGTGGCC
CGCCGCGGCG CGCGCGTGGG CGTGAGCCCG GCGGCGCGCG AGCGGGTGCG CCGCTTCCGC
GCCCACGTGG AGCGCGCGTC CGGCTCCGAG GAGGCGGTCT ACGGGGTCAC CACGGGCTTC
GGCGCGCTGG CGACGGTCCG GATCCCCGCC GGGGAGCGCC GCGAGCTGCA GCACGCCATC
CTGCGCTCGC ACGCCGCCGG CATGGGCCCG TTCGTGGAGC CCGAGGTGGT GCGGGCGATG
ATGCTGATCC GGGCCAAGAC GCTGGCGATG GGGCACTCGG GCGTCCGGCC CGAGCTGCTC
GACGCCCTCG TCGCCCTCCT GAACTCCGGC GTGGTCCCCG CCGTCCCCGA GCACGGCTCG
CTGGGGGCCA GCGGCGACCT CGCCCCCCTG GCCCACGCCG CCCTCTGCCT GACGGGGGAG
GGGTGGGCGC TCGAGGGCGG GGAGGCGGTG CCCGCCCGCG AGGCCCTCGC GCGGGCGGGG
CTCGAGCCCG TGCGGCTCGA GGCGAAGGAG GGGCTCGCGC TCGTGAACGG CACCGACGGG
ATGCTCGCGG TGCTCGTGCT AGCCCTGGAG GACCTGGGGC TGCTCCTGAA GACCGCGGAC
GTCACGGCGG CGATGTCCAT AGAGGCCCTG CTCGGGACCG ACCGGGTCTA CCGGGAGGAG
CTGCACGCCC TGCGGCCCCA CCCCGGGCAG CTCGCGAGCG CCCGCAACAT ACACCGCCTC
CTGCAGGACA GCCCCATCGT CGCCTCCCAC CGCGAGTCGC CGCACCTGGT GCAGGACGCC
TACTCGCTGC GCTGCACCCC GCAGGTCTGC GGCGCGGCGC GGGACACCCT CGCCTTCGCG
GAGGAGGTGG CGCGCAGGGA GCTCGCCTCC ACCACGGACA ACCCGCTCGT GCTGGAGGAC
GGCTCGGTGG AGAGCTGCGG GCACTTCCAC GGGGAGCCGC TCGCCTTCGC GCTGGACTTC
CTCGCCGTGG CCGCCGCGGA GGTCGGCGCC ATCGCCGAGC GCAGGACCGA CCGCATGCTG
GACCCGGCCC GCTCGCAGGG GCTGCCGCCG TTTCTCGTCC CCCGCGCCGG GACCAACTCG
GGCTTCATGG TCGCCCAGTA CACCGCCGCC TCGCTCGCCG AGGAGAACCG GCGGCTGGCC
GTCCCCGCGA GCACGGGCTC CCTGCCGACC TCCGCCATGC AGGAGGACCA CGTCTCGATG
GGCTGGAGCG CGGGCCTCAA GCTCCGCAGG GTGCTGCGCA ACCTCGCCCG CATCCTCGCC
GTGGAGGCGG TCTGCGCCGC CCAGGCCCTC GACCTCCGCT CCCCCCTGGA GCCCGCGCCC
GCCACCGGGG CGGTGCGGGA GCGCATCCGG CGGGAGGTGC CGTTCGTGGA GAGGGACCGC
TTTCTCGCCG CCCACCTGCG GGCCGCCGAG GGGCTGGTCC TCTCCGGGGC GCTCGTGGAG
GCTGCTAATG AAATGGTCGA GCAGAGATAG
|
|---|
| Protein sequence | MAAGAVLVDG LDFGGVIAVA RRGARVGVSP AARERVRRFR AHVERASGSE EAVYGVTTGF
GALATVRIPA GERRELQHAI LRSHAAGMGP FVEPEVVRAM MLIRAKTLAM GHSGVRPELL
DALVALLNSG VVPAVPEHGS LGASGDLAPL AHAALCLTGE GWALEGGEAV PAREALARAG
LEPVRLEAKE GLALVNGTDG MLAVLVLALE DLGLLLKTAD VTAAMSIEAL LGTDRVYREE
LHALRPHPGQ LASARNIHRL LQDSPIVASH RESPHLVQDA YSLRCTPQVC GAARDTLAFA
EEVARRELAS TTDNPLVLED GSVESCGHFH GEPLAFALDF LAVAAAEVGA IAERRTDRML
DPARSQGLPP FLVPRAGTNS GFMVAQYTAA SLAEENRRLA VPASTGSLPT SAMQEDHVSM
GWSAGLKLRR VLRNLARILA VEAVCAAQAL DLRSPLEPAP ATGAVRERIR REVPFVERDR
FLAAHLRAAE GLVLSGALVE AANEMVEQR
|
|---|
| |