| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0537 |
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| Symbol | |
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| ID | 4116153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 567143 |
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| End bp | 567913 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035325 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_643323 |
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| Protein GI | 108803386 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTGC TGGATAGCTT CCGGCTGGAC GGGAGGGTGG CCCTGGTGAC CGGGGCGGCC
CAGGGGCTGG GGCAGGGGAT CGCCGTCGGG CTCGCCGAAG CCGGGGCGCA CATCGCCGCG
CTGGACGTCA TGCCCCTCGA CGAGACGCGG GAGAGCGTCG CCGCGGAGGG CCGCAGGTTC
CATGCCATGG AGTACGACCT GCGGAAGACC GGCGCCGGCC TCGCCGCCAG GATCGTAGGC
GAGTGCGTAG AGGCGATGGG CCGCCTGGAC ATCCTGGTGA ACAACGCGGG CATCATCCGC
CGCGCCCCCG CGCTGGAGTT CTCCGAGGAG GACTGGGAAG AGGTCATCCG CGTCAACCTC
TCGGCCGCCT TCTACCTCTC CCAAGCCGCC GCCCGGCATT TCGTGGAGGC CGGGCGGGGA
GGCAAGATCA TCAACCTGGC CTCGGTCCTC TCCTACGAAG GCGGCATCCT CGTCCCCTCC
TACTCGGCCT CGAAGGCGGG CATCGCCAAC CTCACCCGGG CGCTGGCGAA CGAGTGGGCC
CCGATGGGCA TCAACGTGAA CGCAATCGCC CCCAGTTACT TCGCCACCAG CCTGACGAGC
GCGCTGCGCG CGGACCCGGA GCGCTCGGAG GCCCTGCTTG CGCGCATCCC GGCGGGGCGC
TGGGGCACCC CGGAAGACCT GAAGGGCGCG GCCGTCTTCC TGGCCTCGGA CACCGCCTCC
TACGTACACG GCGCCGTGGT GCCGGTGGAC GGCGGCTGGC TGGGACGCTA G
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| Protein sequence | MGVLDSFRLD GRVALVTGAA QGLGQGIAVG LAEAGAHIAA LDVMPLDETR ESVAAEGRRF
HAMEYDLRKT GAGLAARIVG ECVEAMGRLD ILVNNAGIIR RAPALEFSEE DWEEVIRVNL
SAAFYLSQAA ARHFVEAGRG GKIINLASVL SYEGGILVPS YSASKAGIAN LTRALANEWA
PMGINVNAIA PSYFATSLTS ALRADPERSE ALLARIPAGR WGTPEDLKGA AVFLASDTAS
YVHGAVVPVD GGWLGR
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