Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0511 |
Symbol | |
ID | 4116770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 544718 |
End bp | 546937 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638035299 |
Product | DEAD/DEAH box helicase-like protein |
Protein accession | YP_643297 |
Protein GI | 108803360 |
COG category | [R] General function prediction only |
COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.814841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGGCGA GCCTCGGGCC CCGCCCCGCG AGCCTCGTCG AGCCGCCCGG CGACCTCCAC CCCGCCCTGC GCGAGGCGCT CCGGCGGGGC GGCATGGCCC GCCTGTACTC CCACCAGCGG GAGGCCTACG AGCGGCTGCG CTGCGGGGAG AACGTGGTGG TCGCCACCGC CACCGCGAGC GGGAAGTCCC TCTGCTACAA GCTCTTCGCC TTCCAGGGCG TCCTGGAGGA GCCCCGCAGC CGGGCGCTGT TCCTCTACCC CACGAAGGCG CTCGCCCAGG ACCAGCTCGG CAAGATCCGG GCCTTCGGGC TGCGCGGCGT CCGACCGGCC ACCTACGACG GGGACACCCC CCAGCCCCTG CGGGCGGACA TCCGGCGGCG GGCCAACGTC GTGCTCACCA ACCCGGACAT GCTGAGCGTG GGCATCCTCC CCAACCACGA CGCCTGGGGG CCCTTTCTGC GGGGGCTGCG GGTGGTGGCG GTGGACGAGG CGCACGTGCT GCGCGGGGTC TTCGGCTCGC ACGTGGCGGC GGTCCTGCGG CGGCTGCGGC GGTTGGCGCG GCTGCACGGC GGCGACCCCC GCTTCGTCCT CACCAGCGCC ACCATCGCCA ACCCCCAGGA GCTCGCCGAG ACCCTCACCG GGCTCCCCTT CTCCCCGGTG GAGCGGGACG GGGCGCCCTC CGGGGAGCGC CGGGTCGTCT TCCGCAACCC CCCGCTGCTG GACCGGGAGC GCGGCGAGCG GCGGAGCCTG CTCACCGAGG GGGCGCTGGT CTTCGCCGCG CTCGTCTCGC AGGGGGTAAG GACCATAGCC TTCGCCCGCA CCCGCCGGGC GGCCGAGCTC ATCTACCGCT ACGCCGCCGA CCGGCTCGGC CCCGAGGGGG CGCGCAGGAT CTCGCCCTAC CGCGCCGGGT ACACCCCGGG GGAGCGCCGG GAGATAGAGG GGCGCCTGTT CCGCGGCGAG CTGCTCGGGG TGGTCTCCAC CAACGCCCTG GAGCTGGGGG TGGACGTGGG GTCGCTGGAC GCCGCGATCT GCTGCGGGTA CCCGGGCAGC GTGGCCTCCG TCTGGCAGCA GTGGGGGCGG GCCGGGCGCG GGGAGGGGGC CTCCCTCGCC GTCTACATCC CCGGGCGGGA CGCGCTGGAC CAGTTCCTCT ACGAGAACCC GCAGCGGATC CTGGGGCGGC GGGTGGAGGC CGCCCGCCTC ACGCTGGATA ACCCCTACAT CCTCGCCCCG CACCTGCTCG CGGCGGCCCG CGAGGCCCCT CTGGAGCCCG AAGACGAGGA GTTCTTCGGG CCGCAGTACG GGCGGGTGGC CGGGGAGCTG GAGGAGGCCG GGGCGCTGCT CCGGAGCGGC GGGCGGCTGG TGTACGCCGG GGTGGGCAGC CCGGCGCGCG GGATCTCGCT GCGCTCCGCC TCCTCGGAGA CGGTCGTGAT CGCCGACGGG GAGGGGGAGC TGGTGGGGAC CGCCGAGGCC GCCCGCGCCC CCTCCGAGCT CCACCCGGGG GCGGTGTATT TGCACCGCGG GGCGGCCTAC GAGGTGGAGC GTCTGGACCT CGCGGCCCGC CGGGCGCTCG TCCGCCGGGT CCCCGACCGC TTCTACACCC GGCCGCGGGT GGAGACGGAC GTGGAGATCC TGGAGGAGCT GGAGAGGCGG CCGCTCTCGG GCGGGGCTCT CCTCCACCGG GGCCGGGTGA GGACCACCGA CGCCGTGACC CATTACAAGA AGGTCCGGGT CGCCGACGAC CGGGAGGTGG GGGTGTTCCC GCTGGACCTG CCGGAGGTCT CGCTCGAGAC GCAGGCCCTC TGGGTCACGC TGCCCCCTCC CCCGCCGGAG GGCCGCCCGA GCTTCGAGGG CTTCGGCGGC GCCCTGCACG CCGCCGAGCA CGGCCTAATC GGGCTTCTGC CCCTCTTTGC CATGTGCGAC CGGGCGGACA TCGGCGGGCT CTCCACCCCG GTCCACCGCC AGACGGGCCG GCCCACGATC TTCGTCTACG ACGGCTACCC GGGCGGGGTC GGTATAGCGC ACCGCGGCTT CGACGCCTTC CCCTCCCTGG CCCGCGACGC CCTGGGCGCC ATCGTGCGCT GCCCGTGCGA GCGGGGGTGC CCGGGCTGCG TCCAGTCCCC GAAGTGCGGC AACTGGAACG AGCCGCTGAG CAAGGAGGGG GCGGTATGGC TGCTGCGCTT CGTGCTCGGG CAGGTGGACC GGCACCCGGC CCTCTCGTGA
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Protein sequence | MVASLGPRPA SLVEPPGDLH PALREALRRG GMARLYSHQR EAYERLRCGE NVVVATATAS GKSLCYKLFA FQGVLEEPRS RALFLYPTKA LAQDQLGKIR AFGLRGVRPA TYDGDTPQPL RADIRRRANV VLTNPDMLSV GILPNHDAWG PFLRGLRVVA VDEAHVLRGV FGSHVAAVLR RLRRLARLHG GDPRFVLTSA TIANPQELAE TLTGLPFSPV ERDGAPSGER RVVFRNPPLL DRERGERRSL LTEGALVFAA LVSQGVRTIA FARTRRAAEL IYRYAADRLG PEGARRISPY RAGYTPGERR EIEGRLFRGE LLGVVSTNAL ELGVDVGSLD AAICCGYPGS VASVWQQWGR AGRGEGASLA VYIPGRDALD QFLYENPQRI LGRRVEAARL TLDNPYILAP HLLAAAREAP LEPEDEEFFG PQYGRVAGEL EEAGALLRSG GRLVYAGVGS PARGISLRSA SSETVVIADG EGELVGTAEA ARAPSELHPG AVYLHRGAAY EVERLDLAAR RALVRRVPDR FYTRPRVETD VEILEELERR PLSGGALLHR GRVRTTDAVT HYKKVRVADD REVGVFPLDL PEVSLETQAL WVTLPPPPPE GRPSFEGFGG ALHAAEHGLI GLLPLFAMCD RADIGGLSTP VHRQTGRPTI FVYDGYPGGV GIAHRGFDAF PSLARDALGA IVRCPCERGC PGCVQSPKCG NWNEPLSKEG AVWLLRFVLG QVDRHPALS
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