| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0486 |
|---|
| Symbol | |
|---|
| ID | 4114671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 521437 |
|---|
| End bp | 523161 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638035274 |
|---|
| Product | PHP-like protein |
|---|
| Protein accession | YP_643272 |
|---|
| Protein GI | 108803335 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1796] DNA polymerase IV (family X) |
|---|
| TIGRFAM ID | [TIGR01856] histidinol phosphate phosphatase HisJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGTGC ACAACGCGGA GATAGCCGAG ATCCTCTACG AGGTCGCCGA CCTGCTGGAG
ATAGAGGGCG AGAACCCCTT CCGGGTGCGG GCCTACCGGG AGGCGGCCCG CACCGTCGAG
AACCACCCTA GGAGCCTGGC CGAGATGGCC GGGGAGGGGG AGGACCTCAC CCGCCTCCCC
GGGATAGGGG AGGATCTGGC GGACAAGATC CGGGAGATAG CGCGGACCGG CACGCTGCGG
CAGGCCGAGG AGCTGAGGGA GCGGGTGCCC CCGGGGCTGC GCGGGCTGCT CGGGGTGCCG
GGGCTCGGCC CGCGGCGGGT CAGGGAGCTG CACCGGCGGC TCGGGGTGGA GTCCGCCGCG
GAGCTGGAGA GGGCCGCCCG GGAGGGGAGG GTGCGGAGGC TGCCCGGCTT CGGCGCCAAG
ACCGAGCGCA ACATCCTCGA GGCGCTCGGG CGAAAGGAGA GGCCGCAGCG GTTCAGGCTG
TCCGCCGCCG AGCCCGCCGC CCGGGCGCTG GAGGAGCACC TCGAAGGCTG CGGGGCGGTG
CGGGAGGCCG TCGTGGCGGG GAGCTTCCGG CGCAGAAAGG AGACCGTCGG GGATCTGGAC
GTGGTCGCCT GCTCGCAGGA GGGGAGGCGG GTCATAGAGC ACTTCGTGGC CTTCGAGGAC
ATAGAGCGGG TGGTCTCGAA GGGGAGCACC CGCTCCTCGG TGGTGCTGAA AAACGGCCTC
GAGGCGGACC TGCGGGTGGT GCCGGAGGAG AGCTTCGGGA CGGCGCTCCT GTACTTCACC
GGCGCCCAGC CCCACCACGT GGCCCTGCGC GACATGGCCC TCAAGAGGAG GCTCAAGCTC
AACGAGTACG GGCTCTTCCG GGGGGAGGAG CGGGTGGCCG GCCGCACCGA GGAGGAGGTC
TACGCGCAGC TCGGGCTCCG CTACATCGAG CCCGAGCTGC GCGAGCACCG GGGCGAGATA
GAGGCCGCGC GGCAGGGCTC CCTCCCGCAG CTCCTCGCGC AGGAGGACCT CCGGGGCGAC
CTGCACTCCC ACACCACCGC CACCGACGGG CGCAGCGGCC TGCACGAGAT GGCCGAGGCG
GCGAGGGAGC GCGGCTACGA GTACCTGGCC GTAACCGACC ACTCGCGGCG GCTGCGGGTG
GCCCGGGGGC TCGACGAGCG GCGGCTGCGG GAGCAGATGG AGGAGATCGA CCGTCTCAAC
GAGGAGCTCG AAGGGATCAC CCTCCTCAAG GGCGCCGAGG TGGACATCCT GGAGGACGGT
TCGCTGGACC TCCCGGACGG GGTGCTGGAG GAGCTCGACG TGGTGGTTTG CTCGGTGCAC
CACAAGCTCC GGCTCCCCGA GAGGGAGCAG ACGCGGCGCG TGCTGCGGGC GCTGGAGAAC
CCCAACGTCA ACATCCTGGC CCACCCGACG GGGCGCCTCA TCGGCAGGCG GGAACCCTAC
GAGCTGGACG TCGAGCGGGT GATGGAGGCG GCCCGGGAGC GGGGCTGCGT CCTGGAGCTC
AACTCCAACC CCGAGCGTCT GGACCTGAAC GACGCCCACT GCAAGCTGGC CAAGGAGATG
GGCGTCAAGA TAGCCGTCTC CACCGACGCG CACAGCGCAG ACGAGCTGGC GAACATCCGC
TTCGGGGTGG GGCAGGCCCG CCGCGGCTGG CTGGAGAGGG AGGACGTGGT CAACACCCGG
CCCCTCGGGG AGCTGCGGCG GCTGCTGCGG CGGGAGGGGG CATGA
|
|---|
| Protein sequence | MPVHNAEIAE ILYEVADLLE IEGENPFRVR AYREAARTVE NHPRSLAEMA GEGEDLTRLP
GIGEDLADKI REIARTGTLR QAEELRERVP PGLRGLLGVP GLGPRRVREL HRRLGVESAA
ELERAAREGR VRRLPGFGAK TERNILEALG RKERPQRFRL SAAEPAARAL EEHLEGCGAV
REAVVAGSFR RRKETVGDLD VVACSQEGRR VIEHFVAFED IERVVSKGST RSSVVLKNGL
EADLRVVPEE SFGTALLYFT GAQPHHVALR DMALKRRLKL NEYGLFRGEE RVAGRTEEEV
YAQLGLRYIE PELREHRGEI EAARQGSLPQ LLAQEDLRGD LHSHTTATDG RSGLHEMAEA
ARERGYEYLA VTDHSRRLRV ARGLDERRLR EQMEEIDRLN EELEGITLLK GAEVDILEDG
SLDLPDGVLE ELDVVVCSVH HKLRLPEREQ TRRVLRALEN PNVNILAHPT GRLIGRREPY
ELDVERVMEA ARERGCVLEL NSNPERLDLN DAHCKLAKEM GVKIAVSTDA HSADELANIR
FGVGQARRGW LEREDVVNTR PLGELRRLLR REGA
|
|---|
| |