Gene Rxyl_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0378 
Symbol 
ID4115101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp406295 
End bp406999 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID638035168 
Producttwo component transcriptional regulator 
Protein accessionYP_643166 
Protein GI108803229 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGGG TGCTCATAGT AGAGGACGAC CCGGCGGTGC GCGACGTGGT GGAGCACACC 
CTGTCCCGCG AGGGCATCGA GACCGAGACC GTCCCCGACG GGGAGACGGC GCTGGAGCTG
CTCTCGGACT CCAAGCCCTT CGACCTGGTG CTGCTCGACG TCATGCTGCC GGGGATGGAC
GGCATCTCGG TCTGCCGGGA GCTCAGGGAG AGCCACTCCC CGCACCGCAC CGTCCCGGTG
GTGATGCTCA CCGCCCGCGA CGACGAGACG AGCATCGTGG TGGGGCTGGA GGTGGGGGCC
GACGACTACA TCACCAAGCC CTTCAGCCCC CGGCAGCTCG CCAGCAGGGT GCGGGCGCAG
CTCAGGCGGC AGCGGATGAA CGCCCAGGCC TCCCCCGAGC AGCGCAAGCT GGAGTTCCCC
GGGCTGGAGA TAGACCTCCT GCGCCGGAGG GTCACGGCGC GGGGGGAGCA GGTCGAGCTC
ACCGCCCGCG AGTTCGAGGT GCTGGCGCTT CTGGCCTCCA ACCCGGGCCG GGTCTACAGC
CGGGAGCAGA TAATGGACCA CCTGTGGGGC GGGGAGTTCT TCGGGGAGCC CCGCTCGGCG
GACGTCCACA TCCAGCACCT CCGCCAGAAG ATCGAGCCGG ACCCGAAGAA CCCGCGCTAC
ATCCAGACGG TGCGGGGCAT GGGCTACCGG TTCGCCGAGC TCTAG
 
Protein sequence
MARVLIVEDD PAVRDVVEHT LSREGIETET VPDGETALEL LSDSKPFDLV LLDVMLPGMD 
GISVCRELRE SHSPHRTVPV VMLTARDDET SIVVGLEVGA DDYITKPFSP RQLASRVRAQ
LRRQRMNAQA SPEQRKLEFP GLEIDLLRRR VTARGEQVEL TAREFEVLAL LASNPGRVYS
REQIMDHLWG GEFFGEPRSA DVHIQHLRQK IEPDPKNPRY IQTVRGMGYR FAEL