Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0361 |
Symbol | |
ID | 4115084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 387320 |
End bp | 388321 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638035151 |
Product | inner-membrane translocator |
Protein accession | YP_643149 |
Protein GI | 108803212 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGCTC TGCGGCGCTT CGACCGGGAC CTGCTCGTCC TCGCAGCGGG CGTCCTCGTC CTGATCCCCG TTCCGCTGTT CCTCTCCGGC TTCCTGCTGG AGGTGGCGAT CCAGACCCTC CTCTTCGGGC TCCTCGGCGT CGCCTGGAAC CTCATGGGCG GGTTCGCGGG GCAGTTCAGC TTCGGGCACG CCGCCTTCTT CGGCATCGGG GCCTACGCCA CCGCCGTCGC GGTCACGGAC TACGGGCTCT CGCCCTGGGT CGGCATGCTC CTCGGGGCCG CGCTCGCGGC GGCCTTCGGG GTGCTGGTGG GCTTCCTCTC CTTCCGCTAC GGGCTCAAGG GCGTCTTCTT CGCCCTGGCG ACCTTCGCCT TCGCCGAGAT GCTGCGCCTG ATCTCCCGGA GCCTCGAGGC GGTGAACGCG GCACGCGGAT ACAACATACC CATACGGAGC GGCAACCCGT GGCTGACGCT CCAGTTCCCG CAGGGCTCGC CCAACTACTA CTACGTGATC CTGGCGCTCT TGGCGCTCAG CCTGCTGGCC GTCATCCTCC TGATGCGCAG CCGCGCGGGT ACGTTCATCC TCTCCATCCG GGAGAACGAG GACGCCGCCG CGGCCCTCGG CGTGAACCCG ATGCGCTACA AGCTACTGGC CGTCGCCCTC AGCGCCGCGC TCACCGCCGT TGGCGGGGCC TTCTACGTCC AGTACTTCTT CTTTATAGAC CCGGAGCTGG CCTTCGGCGC AAGCGTCTCC ATCCAGATCC TCCTCCCCGC CATAGTCGGC GGGATCGGGA CGACCTGGGG ACCCGTAGTG GGCTCGCTCA TCATAACCGT GCTCGGTCAG GGGAGCACCG CGCTGGTGCG CACGCCGCCG CCCTTCCTGG AGGCGCTGCA GGGCGTCTCG GGTCTCGACG TGGCCATCTA CGGCGCCCTG ATCGTGCTCG TCGTGCTCTT CCTTCCGAGG GGCGTCTTCG GGACGCTCCG GGAGCGGTTG GGGGCGGCGT GA
|
Protein sequence | MGALRRFDRD LLVLAAGVLV LIPVPLFLSG FLLEVAIQTL LFGLLGVAWN LMGGFAGQFS FGHAAFFGIG AYATAVAVTD YGLSPWVGML LGAALAAAFG VLVGFLSFRY GLKGVFFALA TFAFAEMLRL ISRSLEAVNA ARGYNIPIRS GNPWLTLQFP QGSPNYYYVI LALLALSLLA VILLMRSRAG TFILSIRENE DAAAALGVNP MRYKLLAVAL SAALTAVGGA FYVQYFFFID PELAFGASVS IQILLPAIVG GIGTTWGPVV GSLIITVLGQ GSTALVRTPP PFLEALQGVS GLDVAIYGAL IVLVVLFLPR GVFGTLRERL GAA
|
| |