| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0275 |
|---|
| Symbol | |
|---|
| ID | 4117764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 284515 |
|---|
| End bp | 285507 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638035064 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_643063 |
|---|
| Protein GI | 108803126 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGA GACAGCGGGT ATTCTCCGGC ATACAGCCCA GCGGAAACCT ACACATCGGC
AACTACGTCG GCGCCATAAA AAACTGGGTC GCCATCCAGG AGCGCTACGA GAACTACTTC
TGCATCGTCG ATCTGCACGC GCTCACCGTG CCGCAGGACC CCAAGGAGCT GCGGCGGAAG
ATCCGCGAGG TGGCCGCCAT CTACCTCGCC TCCGGGCTCG ACCCCCAGCG GTGCGTCATC
TTCCGGCAGA GCCACGTTTC GGCCCACGCC GAGCTCACCT GGCTGCTCAA CTGCATAGCC
CGCTTCGGGG AGCTCTCGCG GATGACCCAG TTCAAGGACA AGGCCCGCAA GGAGGGCACC
GAGAGCGCGA GCGTCGGCCT CTTCGACTAC CCGGTGCTCA TGGCCTCGGA CATCCTCCTG
TACAACGCGC ACCTCGTGCC CGTGGGCGAC GACCAGCGCC AGCACCTCGA GCTCACCCGC
ACCCTCGCCC GCAGGTTCAA CAACCTCTAC GGGGAGACCT TCGTGGTGCC GGAGGCCATG
ATCCTGAAGA CCGGCGCGCG GGTCATGGCG CTCGACGCCC CCAACGAGAA GATGAGCAAG
AGCTCTCCCC GCCCGGCCAG CTACGTGGCC ATCCTCGACG ACCCGGACAC CGTGCGGCGC
AAGATCCGGC GGGCCGTAAC CGACTCCGGC ACCGAGATCG TGGCCCGCGA GGACAAGCCG
GCCATAACCA ACCTGCTGGA CATCTACGCC GCGATAACCG GCAAAACCGT CCCCGAGCTG
GAGGAGCAGT ACCGGGGCAG GGGCTACGGG GAGTTCAAGA AGGATCTCGC CGAGGTCGTC
GTCGAGGCGC TCGCCCCCAT CCGCGAGCGG GCGCTCGAGC TGCTCGAGAA CCCCGGCGAG
CTGGAGGAGC TGCTCGAGGC CGGGGCCGAG CGCGCCCGCA AGGCGGCCGC GCCCGCCCTG
CACGCCGCGC GGGCCAAGAT GGGCCTGGGT TGA
|
|---|
| Protein sequence | MDQRQRVFSG IQPSGNLHIG NYVGAIKNWV AIQERYENYF CIVDLHALTV PQDPKELRRK
IREVAAIYLA SGLDPQRCVI FRQSHVSAHA ELTWLLNCIA RFGELSRMTQ FKDKARKEGT
ESASVGLFDY PVLMASDILL YNAHLVPVGD DQRQHLELTR TLARRFNNLY GETFVVPEAM
ILKTGARVMA LDAPNEKMSK SSPRPASYVA ILDDPDTVRR KIRRAVTDSG TEIVAREDKP
AITNLLDIYA AITGKTVPEL EEQYRGRGYG EFKKDLAEVV VEALAPIRER ALELLENPGE
LEELLEAGAE RARKAAAPAL HAARAKMGLG
|
|---|
| |