| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0270 |
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| Symbol | |
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| ID | 4117760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 278756 |
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| End bp | 280768 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638035060 |
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| Product | CRISPR-associated Csh1 family protein |
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| Protein accession | YP_643059 |
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| Protein GI | 108803122 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02556] CRISPR-associated protein, TM1802 family
[TIGR02591] CRISPR-associated protein, Csh1 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGAGA GCATCTACCA GATCGGGAGG GCCATCCTGG AGGAGGGCGG CGGGCGCAGG
ACCGTCCTCG AGTCGCTCGC CGATAGCCCT CCGGCAGACG GCAAGGGCAA ATCCTACATC
GCGATCCTCA AGCTAGATAC CGCCCGCTGG AAGCTGGGCG TCGAATTGAG GGAGCTGGGC
GGGGAGAAGA ACACCGCCGC CCGCTACCTG TGGCTCGGAA ACGCGCCGGC CGCGATGGAC
GACCAGGACC GGCTCACCAC CAACAACCTC GTCTACCTCG TCTCCCAGAC CATCCCGAAC
CTCCTGATGG AGGGGAGGCT CGACCCTGCC TCAGCCCTCT ACGGGAAGCT GAAGAGGCTG
AAAGACGAGC TCTACCTGGA CCTCGGAGAG CCGAGCGAGC TGGGCACAAA GGGCGGCGGG
GCGTACCGCC GCTACCGGTA TTTCTGGGAT GTGGGAAGGC TCGGCATAGA GGGTCCCGGC
CTGGAAGAGC TGCGGCAGGA GGTCAGAGAA GGGCTAAGAC CAGGCAACGT CCCCCAGAAG
GTGGCCCGGG CGTTGCAGAG CCACTTCAGG CAGGAGATCC CGGAGCGCGG CGTGCTCTTC
ACGCTGGAGC TGGACGGTGA GCTCCTGGTG GACGATCCGG CCTACCAGGA GTATCTGGAG
CGCTCCCTGA TAGGACGCGT CTTCGAGGGA GCGCGCGAGG AGGGGGTCTG CCACCTGAGC
GGCAGAAAAG GTCCGGTCAC CACCGACATA ACCCGCTTCA GGTTCAAGTA CTACATAACG
GACAAGGTCG GGTTCGCCTC CGGGGCGACG AAGAAGGGCT TCGGGTCCAA CTTCGCGCTC
AGCAGGGAGG CGTACACGGC GCTTCTGGTC GGGGAGCGGT TCGTGAGAAG GGAGCTCGGC
TTCGTCTTCG CCGGAGCCCG GGGGTACATG ATCCCGGACC TCTACACCGT GGAGGTTCCC
AAAGGGCTTC CCGGGGCTCT GCAGCGCGTC CTCAGGGGCA TCCGCTCGCG GACGCTCTTC
ACCCTCGGAC GGGTGCAGGA GGAAGACCTC GACGAGGAGC TCGAGGACTT CAGGCGGGAG
CACCTGGCGA GCGGGTACAT GATCAACCTG CTCTTCTACC GGCAGAAGCA GGCCAAGTTC
GAGGTCCTCG GGCTCATCCA GGACATCCCC TCCTACCGGC TCGAGGAGCT GCGGAGCCAG
GGGAGGAGGA CCGGCCGCCT GTGGGAGGAG CTCTATGGCA GCGAGGCAAG GGACCTCACC
CTGCAGCAGA TCTACTACCT CATCCCGGTG CGAAAGAGCG GCGACGACAT GCTCACCAAG
GAGATCCTCG CCTTCTACCA CGCCCTGATC TCTGGTGGCC TCATCGACCG CAAGGGCCTC
ATAGACGGAT TCCTGGAGCT CATCAGGGCC TACCGCTTCC GCAACACCGC CGCCTACCAG
GTATCTGCCC CCGAAGAGGG CCAGGAAGAC CTTGCGGTAA CCCGCTACGT GGCCCAGACC
AGCCTGCTGC TCGCGTTTCT GAGGGACCTC GACCAGCTGA AGGAGGAGGA AGTGGATCAA
GGGTATCTGG ACTGCCTCTC GCTCGACGAA GAGGAGAAGG AGTATCTGCG AAGGCTGCGC
TACGACAAAC AGCAGACGGC GCTCTACCTG CTCGGCGCGC TGGTCGCCGA GATCGCAAAC
GCCCAGTGGC GGCTCGGGCC GGAGGGAAGA GGCGGGGAGA AGACGATCCT CAACAAGCTC
AACTACCAGG GCATGACCCT CCCCCGCATC CAGCGCCTCG CCACCGAGCT CTTCGACAAG
CTCCGCCAGT ACCGCTACAC GGACCGCTCC GGCGAGCGGA GGCCGCTCCT GCAGGGCCGC
AATGAATCCA TCTTCGCCCA GGCGCAGGAA CTCCTGACCG AAGAGTGGGG CTCCTGGCGC
CTCACGCCCC CCGAGAACGT CTACTACCTG CTGAGCGGCT ACTCCCACCG AACCTTCAGG
GCCATGACCG CGCGAGAGAG GCAAACGGCA TAG
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| Protein sequence | MIESIYQIGR AILEEGGGRR TVLESLADSP PADGKGKSYI AILKLDTARW KLGVELRELG
GEKNTAARYL WLGNAPAAMD DQDRLTTNNL VYLVSQTIPN LLMEGRLDPA SALYGKLKRL
KDELYLDLGE PSELGTKGGG AYRRYRYFWD VGRLGIEGPG LEELRQEVRE GLRPGNVPQK
VARALQSHFR QEIPERGVLF TLELDGELLV DDPAYQEYLE RSLIGRVFEG AREEGVCHLS
GRKGPVTTDI TRFRFKYYIT DKVGFASGAT KKGFGSNFAL SREAYTALLV GERFVRRELG
FVFAGARGYM IPDLYTVEVP KGLPGALQRV LRGIRSRTLF TLGRVQEEDL DEELEDFRRE
HLASGYMINL LFYRQKQAKF EVLGLIQDIP SYRLEELRSQ GRRTGRLWEE LYGSEARDLT
LQQIYYLIPV RKSGDDMLTK EILAFYHALI SGGLIDRKGL IDGFLELIRA YRFRNTAAYQ
VSAPEEGQED LAVTRYVAQT SLLLAFLRDL DQLKEEEVDQ GYLDCLSLDE EEKEYLRRLR
YDKQQTALYL LGALVAEIAN AQWRLGPEGR GGEKTILNKL NYQGMTLPRI QRLATELFDK
LRQYRYTDRS GERRPLLQGR NESIFAQAQE LLTEEWGSWR LTPPENVYYL LSGYSHRTFR
AMTARERQTA
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