Gene Rxyl_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0269 
Symbol 
ID4117759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp277798 
End bp278742 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID638035059 
ProductCRISPR-associated Csh2 family protein 
Protein accessionYP_643058 
Protein GI108803121 
COG category[L] Replication, recombination and repair 
COG ID[COG3649] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02590] CRISPR-associated protein, Csh2 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCATCC ACGACGGCGA CATCCTCTAC CTCTACGACG CCAAGCTCAC CAACCCCAAC 
GGCGACCCGG ACGACGAGAA CCGCCCGCGC ATGGACGAGG CCACCGGGCG CAACCTCGTC
TCCGACGTCA GGCTCAAGCG CTACCTCCGC GACTACTGGC TGAACGCCGG GGAGGACATC
TGGGTGAGGC GCACCGAGCA GGAGGAGACC ACCAGCGCGA AGCAGCGCAT GAGCGTGCTG
CTCGAGGACT ACAACCGGGA GAACGGCACC AACCTCAACG AGCGCCAGGC GCGCCAGAGC
CGGGAGTTCA AGGACTGGCT GCTCGGGCGG CTCAGGGACG TGAGGCTCTT CGGGGCCACG
ATGCCGATGG AGAACACCTC GGTCACCTTC ACCGGCCCGG TGCAGTTCAG CTGGGGCTAC
TCGCTCAACC GGGTGGAGAT AAACAACTCC GCGACCATCT CCAGCCACTT CGCCGGCAGG
GAGAACGAGT ACGGCACCTT CGGCAAAGAC TGGCGCGTTC ACTACTCCCT GCTCGCCTTC
TATGGCATCG TCAGCCGAAA CCGCGCCCGG CACACCAGGC TCACCGAGGA CGACCTCGCG
GCGCTCGACG ACGCCCTGGT AAGGGCCATC CCGCAGGAGG CGACGACCCG CAGCAAGATC
GGGCAGACCC CCCGGCTCTA CCTGCGCGTC GAGTACGAGG ACGGCTCCCC CCTCCGCCTC
GGGGACCTGC GAGAAGACCT CTCCCTCGAC CCCGCAGACG GCAAGACCCC GGACACCCTG
CGCGACATCC GGGACTTCAC CATAGGCTTC GACCGGGTCC TGGAGCGGGT ACGGACCTCC
GAGGGCGGCA TCCTGCGCGC CCGCCTCTGG ACGCACCCGG AGCTCGGCGA CGCCTTCGAG
CGCCGCCTGA GAGGGGTGCT CGGCGACCGG CTGGAGACCC TCTAG
 
Protein sequence
MAIHDGDILY LYDAKLTNPN GDPDDENRPR MDEATGRNLV SDVRLKRYLR DYWLNAGEDI 
WVRRTEQEET TSAKQRMSVL LEDYNRENGT NLNERQARQS REFKDWLLGR LRDVRLFGAT
MPMENTSVTF TGPVQFSWGY SLNRVEINNS ATISSHFAGR ENEYGTFGKD WRVHYSLLAF
YGIVSRNRAR HTRLTEDDLA ALDDALVRAI PQEATTRSKI GQTPRLYLRV EYEDGSPLRL
GDLREDLSLD PADGKTPDTL RDIRDFTIGF DRVLERVRTS EGGILRARLW THPELGDAFE
RRLRGVLGDR LETL