Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0230 |
Symbol | |
ID | 4117721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 235008 |
End bp | 236717 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638035021 |
Product | PHP-like protein |
Protein accession | YP_643020 |
Protein GI | 108803083 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1796] DNA polymerase IV (family X) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.4179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGAACG CGGACATAGC GCGCGCCCTC GAGACGATAG CCACCCTGCT GGAGATCCGG GGCGAGGAGC ACTACAGGGT GCTCGCCTAC CAGCGGGCCG CCGAGTCGGT CGCCGCCTCC GGCAGGCCGG TGGCCGAGCT GGACGATCCC CGGAGCCTCC CCCACGTCGG CGGCACCACC GCCCGCGTGA TAAAAGACCT CGCGCAGAAC AGAACGCCGG AGATCCTGGC CGAGCTCTCC GCCGAGATCC CGGCGGGGCT GGTGGAGCTC ACCCGCCTGC CGGGCGTGGG GCCGCGCACC GCCGGCCGGC TCTGGCGGGA GCTGGGGGTG ACGAGCGTGG AGGAGGTGGC CGCCCTCGGG GAGGGGAGCA TCGCCGCGCT CAGGGGCTTC GGGAAGAAGA GCGAGGAGAG CATCCTCAGG GCCGCGCGCG CCCACGGCGC GCGGGAGCGG CGGATGCTGC TGGACGAGGC CACCGCCTTC GGCGAGCGGC TGCTGGAGTT CGTCCGCTCC CACCCGGCGG CGGAGCGGGC CGAGATCGCC GGCTCCCTGC GGCGCCAGAA GGAGACCGTG GGGGACCTGG ACATCGTCGC CGCGAGCGAC GACCCGAAGG CCCTCACCGA CGCCTTCGCC GCCGCCCCCT TCGTGGAGGA GGTCGCCTCC CACGGCCCGA CCGGCGCCTC CGTCGTCTGC GCCGGCGGCG TGGAGGCGGA CCTGCGGGTG GTCTCCCCCG AGGCGTTCGG CTCCCTGCTG CACCACTTCA CCGGGAGCCA GGCGCACAAC GTGGCGCTGC GCGAGCGGGC GGTGAAGAGG GGGCTCAGGA TCTCCGAGTA CGGGCTGGCC GGCGCCGGCT CCGACCGCTA CGAGCCCCTG CGGACGGAGG AGGAGCTCTA CGCGCGGCTC GGGCTGCCGT ACATCCCGCC GGAGCTGCGG GAGGACACCG GCGAGATAGA GGCCGCCGAG AGGGGGGAGC TCCCGGACCC GGTCGGGGTC GAAGACATCC GGGGCGACCT GCACGTCCAC ACCAGCTACT CGGACGGCAA GGGCACCATA GAGAGCATGG CCGAGGCCGC CATCGCCCTG GGCTACGAGT ACCTCGTCTT CTGCGACCAC TCGCAGAGCC TGCGCGTGGC GAACGGCCTC TCCCCCGCCC GGCTGGCGGA GAAGATGGAG GCCGTCCGCC GCGCCGACGA GAGGTACCCC GAGATCCACC TGCTGTGCGG GGCGGAGGTG GACATCCTGC GCGACGGCTC GCTGGACTAC GAGGACGCCG TGCTCGCCGA GCTGGACTTC GTCGTCGCCT CGGTGCACAC GGCCTTCCGC ATGGACGAGG GCTCCATGAC CGACCGGATC GTACGGGCCA TGCACAACCC CCACGTCCGG ACGATCGGCC ACCCCACCGG CCGCCTCCTG AACCGCCGCG ACCCCTACGC GGTGGACGTC TCCCGCCTCA TCCGCGAGGC CGCCGCCACG AACACCGCCC TGGAGCTGAA CGCCTACCCG GACCGCCTCG ACCTCTCCGT CCCCCACGCC CGCGAGGCGG CGCGCGCCGG GGTGCGGCTG ACCATCGACA CCGACGCCCA TGACGAGCGG GCGCTCTCGT TCATGCGGTT CGGCGTGTCC CAGGCCCGCC GCGCCTGGGT GGAGAAGGAG AGCGTCATCA ACTGCCTGCC CTGGCCGGAG TTCGAGCGGT ACCTGAGAAG GGGCAAGTAG
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Protein sequence | MQNADIARAL ETIATLLEIR GEEHYRVLAY QRAAESVAAS GRPVAELDDP RSLPHVGGTT ARVIKDLAQN RTPEILAELS AEIPAGLVEL TRLPGVGPRT AGRLWRELGV TSVEEVAALG EGSIAALRGF GKKSEESILR AARAHGARER RMLLDEATAF GERLLEFVRS HPAAERAEIA GSLRRQKETV GDLDIVAASD DPKALTDAFA AAPFVEEVAS HGPTGASVVC AGGVEADLRV VSPEAFGSLL HHFTGSQAHN VALRERAVKR GLRISEYGLA GAGSDRYEPL RTEEELYARL GLPYIPPELR EDTGEIEAAE RGELPDPVGV EDIRGDLHVH TSYSDGKGTI ESMAEAAIAL GYEYLVFCDH SQSLRVANGL SPARLAEKME AVRRADERYP EIHLLCGAEV DILRDGSLDY EDAVLAELDF VVASVHTAFR MDEGSMTDRI VRAMHNPHVR TIGHPTGRLL NRRDPYAVDV SRLIREAAAT NTALELNAYP DRLDLSVPHA REAARAGVRL TIDTDAHDER ALSFMRFGVS QARRAWVEKE SVINCLPWPE FERYLRRGK
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