Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0225 |
Symbol | |
ID | 4117716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 228998 |
End bp | 230713 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638035016 |
Product | ABC transporter related |
Protein accession | YP_643015 |
Protein GI | 108803078 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATATC CTTTGTGTGG GATGGAGCCC GCGGTGAGCA TAGAGGGGCT TGGCTATCGC TACCGGGGCC GGGAGCGGCC CGCCCTCCGG GGGGTGGATC TGGAGGTCGC CGGGGGCGAG TTCGTGGTGG TCATGGGCCA CTCCGGGGCC GGCAAGAGCA CCCTCTGCGC CGCCCTCAAC GGGCTGGTGC CGCGCTTCTT CCGGGGCAGC ATGGAGGGGG AGGTCAGGAT CCGCGGCCGC CCCACCCGCG GGCGGCGGGT CGGGGAGCTG GCCCGGGAGG TGGGGCTGGT CTTCCAGGAC TTCGAGGCCC AGCTCTTCTC CACCAACGTG GAGCTGGAGG TGGCCTTCGG CCTGGAGAAC TTCGCCGTGG AGAGGGAGAA GATGCGGGAG CGGGTTCGGG AGGCGCTGCG GATGGTGCGG CTGGAGGGCT TCGAGCGCCG GCAGCCGGCC ACCCTCTCCG GCGGGCAGAA GCAGCGGCTG GCCATCGCCT CCGTGCTCGC CATGGAGCCG CCCATCCTGT GCCTGGACGA GCCGACGACC GACCTGGACC CCGCGGGGAA GCAGGAGATC TTCGAGATCA CCGGAGAGCT GCGGAAGAGG GAGGACATGA CCCTCATCGT GGTGGAGCAC GAGACGGAGG AGACGCTGGA CGCCGACCGC ATCGTCGTGC TGCGGGAGGG CGAGATCCTG GCCGACCGTC CGGCACGGGA GCTGCTGCGC GACGTGAAGC TGCTGGAGGG CGCCCGGGTC ATGCCGCTGC AGGTGCCGCG TTTCTTCGGC GGGCGGGGGT TGGGGAGGGA GGAGCTGCCC CTGACCCCCT CTGAGGGGGT GCAGGAGTTC CGCCGGCGCG GCTGGCGCAT AGACCCCCGC CGCCACGACG AGCTCCTCGA GGAGGACCGG GCCCGCGAGC GGGGCTACGG CGAGCCCCTC ATCGAGGCGG AGGGGCTCGC CCACCGCTAC CCGAACGGCG TCGCCGCCCT GGAGGGGGTG GACCTCACCG TGCGGCGCGG CGAGTTCCTC GCCGTGCTCG GCCAGAACGG TTCCGGCAAG ACCACCCTCG TCAAGCACTT CAACGGGCTG CTGGAGCCCT CGGAGGGCTC GGTGCGGGTC GGGGGGGAGG ACACCCGCGA GCAGGGGCTC CTCGGGCTCG GGCAGCGCGT GGGCTACGTC TTCCAGAACC CCGACCACCA GATCTTCTCG GACACCGTCT TCGACGAGGT GGCCTTCGGG CCTAGGATAA GGGGCCTGGG GGACGGCGAG GTGCGGGAGC GGGTCGAGGA GGCGCTCGCC GCGGTGGGGC TGGAGGGCTT CGAGGAGGAG GACCCCTTCG GGCTCACCAA GGGCGAGCGC CAGCGGGTGG CGGTGGCGAG CGTGCTCTCC GTGAGGCCGG AGGTTTTGAT CCTGGACGAG CCCACGACCG GCCTCGACTA CGCCGAGCAG CGGAGCATGA TGGAGCTGGT CAGGCGCCTC AACGAGGCCG GGTCCACCAT AATCGTGGTG ACCCACGCCA TGTGGGTCGT CGCCGAGTAC GCGCACCGGG CGGTCGTGAT GCGGGACGGA CGCCCGGTGC TCTCGGGGAG CGTGCGCGAG GTGTTCGCCC GCGAGCGGGA GCTGCGCGCG GCGGCGCTCA GGCCCCCGCA CATCGTCTCC ATGAGCAACG CCCTCGGCCA CACCGCCCTC TCGGTGGAGG AGCTGTCGCG CATCACGGAG GGATGA
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Protein sequence | MQYPLCGMEP AVSIEGLGYR YRGRERPALR GVDLEVAGGE FVVVMGHSGA GKSTLCAALN GLVPRFFRGS MEGEVRIRGR PTRGRRVGEL AREVGLVFQD FEAQLFSTNV ELEVAFGLEN FAVEREKMRE RVREALRMVR LEGFERRQPA TLSGGQKQRL AIASVLAMEP PILCLDEPTT DLDPAGKQEI FEITGELRKR EDMTLIVVEH ETEETLDADR IVVLREGEIL ADRPARELLR DVKLLEGARV MPLQVPRFFG GRGLGREELP LTPSEGVQEF RRRGWRIDPR RHDELLEEDR ARERGYGEPL IEAEGLAHRY PNGVAALEGV DLTVRRGEFL AVLGQNGSGK TTLVKHFNGL LEPSEGSVRV GGEDTREQGL LGLGQRVGYV FQNPDHQIFS DTVFDEVAFG PRIRGLGDGE VRERVEEALA AVGLEGFEEE DPFGLTKGER QRVAVASVLS VRPEVLILDE PTTGLDYAEQ RSMMELVRRL NEAGSTIIVV THAMWVVAEY AHRAVVMRDG RPVLSGSVRE VFARERELRA AALRPPHIVS MSNALGHTAL SVEELSRITE G
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