Gene Rxyl_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0141 
Symbol 
ID4117711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp146058 
End bp146702 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content70% 
IMG OID638034933 
Productisochorismatase hydrolase 
Protein accessionYP_642932 
Protein GI108802995 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCA CGGTAGAGGT TCCGGAGTAC GAGGTTCACG AGGAGATCCG TGTAGACCCG 
GCGCGCACGG CGCTCGTCGT CGTGGACATG CAGAACGACT TCGTCAAGGA GGGCGGCTCG 
CTCGTCGTGC CGGACGCCGG GGCGACCATC CCCGCCATAA GGAGGCTCCT CGAGCTCGCC 
CGCGGGTCCG GGATGAAGGT CGTCTTCACC CAGGACACGC ACTCCGAGGG CGATCCGGAG 
TGGGAGATCT GGGGCGAGCA CTGCCGGGAG GGGACGTGGG GCTGGCGGAT CGTGGACGAG 
CTCGCGCCCC GCGAGGACGA GCTCGTCATC CGCAAGGTGC GCTACGACGC CTTCTACGGC 
ACGCACCTCG ACCACTTCCT CCGGGTCTGG GGGGTGGACA CCCTGGTGAT CTGCGGCACC 
GTGGCGAGCA TCTGCGTCCA CTACACCGCG GCGAGCGCGG CGCTGCGCTG GTACAAGGTG 
GTGATCCCCA AAGACGCCAC CTCCGCGCTC CACCCGTTCG ACCTCGAGGC CTCCCTGCGC 
CAGACCGCCT TCCTGTTCGC GGGGAGGATA ACGGAGAGCG GGGGCGTACG GGCGGAGCCG 
CAGCCCTACC GGAGCAAGCT GGAGGAGGCC GCCGGGGAGC GCTAG
 
Protein sequence
MARTVEVPEY EVHEEIRVDP ARTALVVVDM QNDFVKEGGS LVVPDAGATI PAIRRLLELA 
RGSGMKVVFT QDTHSEGDPE WEIWGEHCRE GTWGWRIVDE LAPREDELVI RKVRYDAFYG 
THLDHFLRVW GVDTLVICGT VASICVHYTA ASAALRWYKV VIPKDATSAL HPFDLEASLR 
QTAFLFAGRI TESGGVRAEP QPYRSKLEEA AGER