Gene Rxyl_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0118 
Symbol 
ID4117785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp123110 
End bp123733 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content78% 
IMG OID638034910 
Product4-diphosphocytidyl-2C-methyl-D-erythritol synthase 
Protein accessionYP_642909 
Protein GI108802972 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.176077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGGG TCTTCGGGGT GCTGCTCGCC GCCGGGGAGG GGAGCCGCTT CGGGGGCGGG 
AAGCTGCTCG CCCCCTTCCG GGGGCGGCCG CTGGTGGAGC ACGCGCTCCT CGCGCTGCGG 
GAGGCCCCGC TGGAGGGGGC CGTGGCGGTG GTGGGGGAGG GGGATGCGGA GGGGGTGCGC 
CGGCTGTGCG GGGAGCACGG GGTGCGCGTG GTGGAGAACC CCCGCTGGCG GGAGGGGCAG 
TCCACCTCCG TGCTCGCCGG GATCGGGGCG CTCGGGCCGG AGGCCCGGGC GGCGGTCGTC 
CTGCTCGGCG ACCAGCCGCT CGTGGGGGCC GGGGCGGTGG ACCGGCTCGT CCGGGCCTTC 
GAGGAGGGGG CGAAGATAGC GGCGGCCACC TACGCCGGGA GGGTGCGCAA CCCGGTGCTC 
TTCGCCCGGG AGGTCTGGCC GCTTTTGGAG GAGGAGCTCG CGGGGGACGA GGGTGCCCGG 
CGCGTGCTGC GGCGCCACCC CGGGCTGGTG CGCCGGGTGC CGTGCGACGG CGTCGGGGAC 
CCGGCCGACG TGGACACCAG GGAGGATCTG CGGCGGCTCG AGGAGCGGGC CGCGCGGGGA 
GAGAGGAGGT TGCCGGCGCG ATGA
 
Protein sequence
MSGVFGVLLA AGEGSRFGGG KLLAPFRGRP LVEHALLALR EAPLEGAVAV VGEGDAEGVR 
RLCGEHGVRV VENPRWREGQ STSVLAGIGA LGPEARAAVV LLGDQPLVGA GAVDRLVRAF 
EEGAKIAAAT YAGRVRNPVL FAREVWPLLE EELAGDEGAR RVLRRHPGLV RRVPCDGVGD 
PADVDTREDL RRLEERAARG ERRLPAR