Gene Rxyl_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0100 
Symbol 
ID4117671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp104425 
End bp105876 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content75% 
IMG OID638034893 
Producthypothetical protein 
Protein accessionYP_642892 
Protein GI108802955 
COG category[S] Function unknown 
COG ID[COG3883] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAACGG CTCTGCTACG CGCCGCCTTG GGCGGCAGGT TGGTCCTTTT CGCGTCCGCG 
CTGTGCGCGG TGCTGCTGCT GGCGGGCTCC GCCGGGGCGC AGACGCCCGA GATAGATTCG
AAGCGGGCCG AGGTGCAGCG GGTGCAATCC CGGATCTCGG CCACCCTGCA GGACATCTCC
CGGATACAGA GCTCCTACGA GGAGTCGCAG GCCCGCCTGG CGGACCTGAG GGAGAGGATA
GCCCGAAACC GGCGGGAGAT AGAGGAGGCG AGCCGGGAGC TGGAGGCCGC CCGGGAGCGG
GTGTCCGAGC GGGCCGAGGG CTCCTACAAG GCCGGCGGGG TCATGTACCT CGACGTGCTG
CTCTCGGTGC GCTCCTTCTC GGAGTTCGCC GGCAGGAGCC GCTTCGTGCT GCGGGCGCTG
GCGGAGGACC GCAGGATCGT GAGCCGTCTG AGGGAGGCGC GCCGCGAGCT GGAGGAGCGG
GAGGCGGCCC TGCGGGAGAG CCTGCGCGAG CAGCGGGCCG TCTCCGCCGG GCTCCTGCAG
AAGCGCCGGG CGATAGAGCG GCGGCTGGAG GAGCACCGCC GGGCCTACGC GGCGCTGGAC
GCGGAGCTGA AGGAGCTGGT CCGCAGGGAG CAGGAGCGGC GCGCCCGCGA GGCGGCCGAG
GCGCGGCGGC GGGCCGCGGC GGAGGCCGCC GAGCGGCAGG CCGCCCTGGA GCGCCGGGCC
GCCGCCCCGG AGGAGCCGGC CGCCGGGTCC CCCGAACCGG CCCGGGAGGC CGCAGCCCGG
GATCTGGGGG AGGCCAGCGC GCCCGCCGCC CCGACCGAGG GCGCCGAGAG GCCAAAGCCC
CCGCGGGAAG CCGCCGCGGT GCCCCCGGCC TCCCCCGCCC CTCCCTCCGA AGCAGAGGCC
CCCGAGCCCG AGGCGCCCGC GGCGGAGAGC GCCGGGCCCC CGCCCTCGGC GGCGGAGGAG
CAGTACGAGG AGCCCGAGGC GCCCGCGCCC GAGGTCTCGC GGCCGGAGGT CTCCTCCGCC
GACCCGCGGG TGCAGGCCAT TCTGGAGAAC CCCAACATCA CGCTGACCGG GGTGGCCCGC
CAGGATCTCG TCTCCGGCAT CGTGGACCCG CGGGTCCTGG ACGTGGTGGA GTTCGCGGCC
TCGGAGCACG CGATCTCGAT CTCCGTCTTC GCCACCGGGC ACCCCTACGG CCCCACCCTC
GACGCCCTCG GCTACGCCGG GTACCCCAAC TCCCACTACT TCGGCCGGGC GGTGGACATC
TACGCGGTCG ACGGGGCCCC GGTGAGCAGC GGCAACCAGG CCGCCTACGA GCTGGCGCAG
GCCATCTACG CCCGGTTCTC CCCGGCCGAG CTCGGGAGCC CCTGGACCTT CGGCGCGGGC
TCCTTCTCGG ACGCGCTGCA CCAGGACCAC ATACACGTGG GTTGGGCCTA CGCCGCCAAC
GGCGGCCTCT AG
 
Protein sequence
MRTALLRAAL GGRLVLFASA LCAVLLLAGS AGAQTPEIDS KRAEVQRVQS RISATLQDIS 
RIQSSYEESQ ARLADLRERI ARNRREIEEA SRELEAARER VSERAEGSYK AGGVMYLDVL
LSVRSFSEFA GRSRFVLRAL AEDRRIVSRL REARRELEER EAALRESLRE QRAVSAGLLQ
KRRAIERRLE EHRRAYAALD AELKELVRRE QERRAREAAE ARRRAAAEAA ERQAALERRA
AAPEEPAAGS PEPAREAAAR DLGEASAPAA PTEGAERPKP PREAAAVPPA SPAPPSEAEA
PEPEAPAAES AGPPPSAAEE QYEEPEAPAP EVSRPEVSSA DPRVQAILEN PNITLTGVAR
QDLVSGIVDP RVLDVVEFAA SEHAISISVF ATGHPYGPTL DALGYAGYPN SHYFGRAVDI
YAVDGAPVSS GNQAAYELAQ AIYARFSPAE LGSPWTFGAG SFSDALHQDH IHVGWAYAAN
GGL